Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0142 ATGGGAGAGGTGGCGCGTGGAGGTGGTTGTCCTCCGATGGATCTCTTCCGTTCCGAGTCGATGCAACTCGTTCAACTCATCATTCCAATCGAATCCGCTCATCTCACCGTTTCTTATCTCGGTGACCTTGGCCTCCTTCAGTTCAAAGATCTTAATACAGATAAAAGCCCTTTTCAACGGACTTATGCTGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAGCAAATGTCGAAGGCAGATGTTTTACCAGTACATTCTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCAGACATTGAGTCAGAGTTAACCGAGATGAATGCGAATGGCGAAAAGTTGCAACGCTCTTACAATGAACTTGTGGAGTATAAGCTTGTTCTTGAGAAGGCTGGTGAGTTTTTCCACACTGCTCAAAGCCGTGCCATAGAGCAGCAAAGACAAAATGAATCACGCCAACTGGTTGATGAATCTTTGGAAACACCTTTATTACAAGACCAAGAATTGGTAGGCGATTCATCGAAGCAAGTTAAATTGGGGTTTTTAGCTGGTCTCGTTGCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACCCGAGGCAATGTGTTTTTGAGGCAGTCTGCTGTTGAGAATCCTCTCACAGACCCGGTTACTGGAGAAAAGACTGAGAAAAATGTGTTTGTGGTCTTCTATGCTGCCGAAAAAGCGAAATCCAAGATTCTGAAAATATGTGACGCCTTTGGTGCTAATCGTTACCCTTTTGCAGAGGATGTTGGAAAACAAACTGAAATGATTAAAGAGGTATCCCGAAGAATTTTAGAATTGAAGACAACAATAGATGCTGGACTGCTGCATCGGGCTACCTTGCTACAGACTATTGGTGCTCAATTTGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCTATTTACCATACCCTGAACATGCTAAGCCTTGATGTGACAAAAAAATGTCTCGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGATCCAGGATGCATTACACCTGGCTGCAATTGACTCTAACTCTCAAGTTAGTGCCATTATGCAAATTCTGCATACTAGGGAGTTGCCACCTACATATTTTCGCACAAACAAATTTACTTCTTCATTTCAAGGAATTATTGATTCATATGGGGTTGCGAAGTATCAAGAGGCAAATCCTACTGTGTACACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGTGATTGGGGACATGGAATATGTATACTACTAGCTGCTCTATATTTCATAATTCGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGAAATGACTTTTGGAGGACGTTATGTTATTTTTATGATGGCACTCTTCTCAATCTACACTGGTGTGATATATAATGAGTTCTTCTCTGTCTCATTTGAAATCTTTGGTCCTTCTGCATATGAATGTCGTGATCTGGCTTGCACGGAAGCTACAACAGTGGGCCTGATAAAAGCGCGCCGTACATACCCATTTGGTGTGGATCCTGTATGGCATGGTTCACGAAGTGAATTACCATTTCTTAACTCGTTGAAAATGAAAATGTCTATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTTTTGTAATGCTAAATTCTTTAAGAACAGCGTAAATGTATGGTTCCAGTTTGTTCCCCAGATAATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACCGGTTCTCAAGCTGATTTGTATCATATATTGATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTATTTGTTGGTCAGAAATATCTGCAGATTACCCTTTTGATTCTGGCCTTTATAGCTGTCCCCTGGATGCTGATCCCAAAACCTTTTATTTTGAAGAAGCAACATGAAAATAGGCACGGGGTTGAATCTTATGCACCACTTCAAACGACAGAGGAGAGCTTGCAAGTAGAGTCAAATCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACCATAGAATTTGTACTTGGAGCAGTTTCTAATACAGCTTCTTACCTTCGTCTATGGGCCCTAAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTAATGGCATGGGGGTACCATAATGTGTTTATCCTGATAATTGGTCTCATTGTGTTCATTTTCGCTACTGTTGGAGTGTTGCTTGTGATGGAAACTTTGAGTGCCTTCTTGCATGCTTTACGTCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCACCCTTTCTCCTTCTCATTGGTAGAAGATGAGGATGAGTGA 2460 0.4122 MGEVARGGGCPPMDLFRSESMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNTDKSPFQRTYAAQIKRCGEMARKLRFFKEQMSKADVLPVHSTTVVDVNIDDLEVKLADIESELTEMNANGEKLQRSYNELVEYKLVLEKAGEFFHTAQSRAIEQQRQNESRQLVDESLETPLLQDQELVGDSSKQVKLGFLAGLVAREKSMAFERILFRATRGNVFLRQSAVENPLTDPVTGEKTEKNVFVVFYAAEKAKSKILKICDAFGANRYPFAEDVGKQTEMIKEVSRRILELKTTIDAGLLHRATLLQTIGAQFEQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALHLAAIDSNSQVSAIMQILHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICILLAALYFIIREKKLSSQKLDDITEMTFGGRYVIFMMALFSIYTGVIYNEFFSVSFEIFGPSAYECRDLACTEATTVGLIKARRTYPFGVDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIIMSFCNAKFFKNSVNVWFQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHILIYMFLSPTDDLGENQLFVGQKYLQITLLILAFIAVPWMLIPKPFILKKQHENRHGVESYAPLQTTEESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYHNVFILIIGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLVEDEDE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0142 819 PANTHER VACUOLAR PROTON ATPASES 6 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal9g0142 819 Coils Coil 101 128 - -
Lal9g0142 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
Lal9g0142 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 819 - -
Lal9g0142 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0142 Lal-Chr9 909541 917953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0142 13 819 Primary Pumps ATPases(2) AT2G21410 76.609 0.0 1299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0142 K02154 - gmx:100810062 1418.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0142 9 909541 917953 Lal9g0142 9 909541 917953 ECH
Lal2g0125 2 761597 770881 Lal9g0142 9 909541 917953 LSH