Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0130 ATGGCCGCTACTTCACAAAACCTCTCTACTCTCTCTTCCTCTTCCTCCACCCTCTCTCTCAAAACCAAAACCCTCCCTAAACCCTCTTTCCTCCCTCTTCCCCGCCCCCGCCGCAGTACCCCGCTCCTCGCCGCCCACAACAACCCTATCTCCGATGTTGTCTTGTCGAAAACCCCACGCCACGACGATGACGACAAGCCACGTGAGGAGTGCGGCGTCGTTGGTATCTACGGCGACCCAGAGGCCTCTCGACTCTGCTACCTCGCTCTTCACGCGCTTCAACACCGTGGCCAAGAAGGTGCCGGTATTGTCACCGTAAATAATAACGTCCTCCAATCTGTTACCGGCGTTGGGCTTGTCTCCGATGTGTTCAACGAAACCAAGCTTGACCAGTTACCCGGTAATTTAGCCATTGGCCATGTTCGTTATTCAACCGCTGGTCAATCCATGCTTAAAAATGTTCAACCTTTTGTTGCAAGTTACCGGCTTGGTTCTGTTGGAGTTGCCCACAATGGCAATTTGGTAAATTATCGCACTTTGAGGACCAAGCTTGAAGAAAACGGTTCTATTTTTAACACCACTTCAGATACTGAGGTTGTGCTTCACCTTATTGCTACCTCAAAGCATACACCTTTTATTTTGAGGATTATTGATGCTTGTGAGAAAATTGAAGGTGCTTATTCCATTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTTAGGGACCCACATGGGTTTAGACCTTTGGTTATGGGGAGAAGGGCTAATGGTGCTGTTGTTTTTGCCTCTGAGACTTGTGCACTTGATTTGATTGAGGCCACTTATGAGAGGGAAGTATACCCTGGTGAGGTTATTGTTGTGGATAGAGATGGTGTTCAATCACTTTGTTTAATGTCTCATCCACAACCAAGGCAGTGTGTTTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTATGGGAGGTCAGTGTATGAATCGCGAAGACATTTCGGGGAAATTTTGGCTACTGAGAGCCCTGTTGATTGTGATGTTGTGATAGCAGTGCCTGATTCCGGTGTTGTTGCTGCTCTTGGTTATGCTGCAAAGGCCGGTGTTCCTTTTCAGCAAGGGCTTATTAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGAGACTTTGGCGTGAAGCTTAAGTTATCGCCTGTTCGTGCGGTACTTGAAGGTAAGAGGGTTGTGGTTGTTGATGATTCAATTGTGAGGGGAACTACATCATCCAAGATAGTGAGGTTGCTCAAGGAGGCAGGTGCAAAGGAAGTTCACATGAGGATTGCAAGTCCACCAATAATCGGTTCATGTTATTATGGAGTGGACACACCAAGCTCGGAGGAGTTGATTTCTAATAGGATGAGTGTGGAAGAGATAAGAGAGTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAGGTATTTGGGGAACGACTCTCCTAATTTCTGTTACGCTTGTTTCTCTGGGATTTACCCGGTTGAGCCTAGGGAGCTTAAAGTTAAGAGGGTTGGTGACTTTGTCGATGATGGCTTAAATGGGAGTTTGGAATCAATTGATGGAGGCTGGGTTCAAGCAAACAGAAATCTAAAGGAAGTGAAGGTTGGTGGTACTTAG 1674 0.46 MAATSQNLSTLSSSSSTLSLKTKTLPKPSFLPLPRPRRSTPLLAAHNNPISDVVLSKTPRHDDDDKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSVTGVGLVSDVFNETKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVASYRLGSVGVAHNGNLVNYRTLRTKLEENGSIFNTTSDTEVVLHLIATSKHTPFILRIIDACEKIEGAYSIVFVTEDKLVAVRDPHGFRPLVMGRRANGAVVFASETCALDLIEATYEREVYPGEVIVVDRDGVQSLCLMSHPQPRQCVFEHIYFALPNSVVYGRSVYESRRHFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKRYLGNDSPNFCYACFSGIYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNLKEVKVGGT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0130 557 CDD PRTases_typeI 333 444 IPR000836 -
Lal9g0130 557 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 42 543 - -
Lal9g0130 557 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 71 290 IPR017932 -
Lal9g0130 557 CDD GPATase_N 71 320 IPR035584 -
Lal9g0130 557 Pfam Glutamine amidotransferase domain 149 268 IPR017932 -
Lal9g0130 557 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 71 512 IPR029055 -
Lal9g0130 557 MobiDBLite consensus disorder prediction 1 45 - -
Lal9g0130 557 MobiDBLite consensus disorder prediction 1 24 - -
Lal9g0130 557 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 71 294 IPR029055 -
Lal9g0130 557 Hamap Amidophosphoribosyltransferase [purF]. 70 511 IPR005854 GO:0004044|GO:0009113
Lal9g0130 557 SUPERFAMILY PRTase-like 306 517 IPR029057 -
Lal9g0130 557 PIRSF Pur1 67 525 IPR005854 GO:0004044|GO:0009113
Lal9g0130 557 TIGRFAM purF: amidophosphoribosyltransferase 71 512 IPR005854 GO:0004044|GO:0009113
Lal9g0130 557 Pfam Phosphoribosyl transferase domain 345 440 IPR000836 -
Lal9g0130 557 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 42 543 - -
Lal9g0130 557 Gene3D - 330 494 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0130 Lal-Chr9 848559 850232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0130 62 544 PRT Gene Family AT2G16570 84.742 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0130 K00764 - gmx:100801720 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0130 9 848559 850232 Lal9g0130 9 848559 850232 ECH