Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0123 ATGGCATCCAAGAGAATACACAAGGAGCTTAAGGAGTTGCAGAGGGATCCACCAACTTCATGCAGTGCAGGCCCTGTGAGTGAGGATATGTTCCATTGGCAAGCAACCATCATTGGTCCAAATGACAGTCCCTATGCTGCAGGAGTTTTCCTTGCCACTATCCATTTCCCTCCTGATTATCCCTTCAAACCTCCCAAGGTTGCATTCAGGACCAAGGTATTCCATCCCAACATAAATAATAATGGCAATATTTGTCTAGACATACTCAAAGAACAATGGAGTCCTGCTCTCACCATATCCAAGGTGCTGCTCTCTATTTGTTCACTGCTAACAGATCCAAATCCTGATGACCCTCTTGTGCCTGAAATTGCTCATATGTCACATGGACTTATTAATAGCACAGGCTCAACCATTGTGTTTTGTGTCCAGAAAGAAGGTTTTTATGCGCTAGAGGATCATTTGGAGGATATCAAATCTAGTAGCATTGTAAGCAGTGCACGCCGCAGAGTGGAAGCAATATTACCCGTAATAACCGGGATTAGAATTGATAGTTATAGCAGACACCTTCTGAATTGGGCTCTTTCCATAGTTGCTGAACCTGGTGACTATGTTATTGCTCTTTATGTAGTTAAAACTCCAGATTGTGTTTCCAAAAACAAGGCCCTCATAAATGGCTACTTAGAGGTTTATGAAGGCCTATGTCATGTTAAGAAGGTAGGTCTCATTGGTCAAGTCTTATCAGGGAGCTCTTTTAGAAGCATTCTTGTTAGAGAAGCAAAAATTCATGCTGCTATGGCTCTAGTGGTAGGGGGTAGAAAAACTGCCACAGCCAAATACTGCTCCAAACGACTGCCACTAAACACAAATGTTCTGGCCATCCAAGATTCAAGAATTGTTTTCAGGAGGTGCACCAATAACCAACTATCAGGTGGTCTTATGCTGGATCCAAGACCGAGTTTAACAAGCATAGGAAATCTCAGCAACAGAGTAAACCATTCTGAACTCGGTGACTTTGAGGCGGAGGCTGAAAGATCAACAAGCCAAAATACTATAGAATTGAAGAAGGAAGCATCTAATGGATTAGAGAGGCACAAGCTAAGATCAATATCTATGTTTGCTGGTGATCCTGCTGAACAAAATCTTGGTTGGCCTTTACTCCGAAGAGCTAAATCAGAAATCACTCAAACCCATCATGCAAGGGACATGTCAGTAGTGCAATGGGTTATGAGCTTACCAGATCGTTCACCAAAGAGAAGTCCTCATTCTTGTTATTCCATTGAGGAAAATCCATCAGAAAGGGGCATTGGCATGGAAGATGAGAGCAGTACTAATGGTTCACCTCCATGTGTTGTTGAACTACCTAAAGGACTAGAGGGAAAGTTAATTGTAAATTCACTCAATTGCAAGTGGTTCAGCCTTGAGGTTCTTAAGTCCTGCACTAGCTACTTCTCTTCAGAAAACTTGATTGGGAAAGGGGGGAGCAACCGTGTGTACAAAGGAGTTCTCCCGAATGGGAAGCCAATAGCAGTCAAAGTTTTGAAGTCATCAAAAGAAGCTTGGAAAGATTTTGCTCTTGAGGTGGAAATAATATCCTCATTGGAGCATAAAAACATAACCCCTCTACTAGGCATTTGCGTTGAGGACAATGCCTTAATATCTGTCTATGACTATTTACCCAAAGGCAGCTTAGAGGAAAATCTACATGGCAAAAAGAACGAGAATGAAGCCATCTTGTCATGGGAAATGAGATTCAATGTAGCTGTTGGGATTGCTGAAGCACTAGATTATCTACACAGGGAAACTCTGAAGCCGGTTATACATAGGGATGTCAAGTCTTCAAACATTCTTCTTTCCCATGGGTTTGAACCACAATTATCTGATTTTGGACTTGCAATATGGGGACCAACAGCTTCATCCTTTCTGACACAAGAAGATGTTGTAGGAACATTTGGTTATCTTTCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGCTTATGCCTTTGGTGTAGTGCTACTTGAACTAATATCAGGAAGGGAACCAATCTGTTCAGAACCTTGCAAAGGAGAGGAGAGCTTGGTGTTGTGGGCAAAACCAATAATAGAGAGCGGGAATGTTAAAGGCTTATTGGACCCAAATTTAGAAGGGAAGTTTGATGAGACTCAAATGCAACGAATGGTTCTAGCAGCATCTCTATGCATTACTCGTGCTGCTAGGCTTCGTCCTAAACTGAACCAGATACTAACAATCTTAAAAGGAGATGAAAAGGTTGAATATTTCTTGAACTCCCACGGAGATGATTATGAGCATTCAGAAAATCAAGAAAGTATTGATGACGAAGTCTATCCAAATTCAAGTGCAGAGTTACACTTGAGTTTGGCATTACTTGGTATTGATGATGACACTACATCATATAGTTGTACAGATCACAGCAACGTTGAACACTCCAAAGAAAGATGGAGCAGATCATCAAGTTTTGATTAG 2496 0.4143 MASKRIHKELKELQRDPPTSCSAGPVSEDMFHWQATIIGPNDSPYAAGVFLATIHFPPDYPFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMSHGLINSTGSTIVFCVQKEGFYALEDHLEDIKSSSIVSSARRRVEAILPVITGIRIDSYSRHLLNWALSIVAEPGDYVIALYVVKTPDCVSKNKALINGYLEVYEGLCHVKKVGLIGQVLSGSSFRSILVREAKIHAAMALVVGGRKTATAKYCSKRLPLNTNVLAIQDSRIVFRRCTNNQLSGGLMLDPRPSLTSIGNLSNRVNHSELGDFEAEAERSTSQNTIELKKEASNGLERHKLRSISMFAGDPAEQNLGWPLLRRAKSEITQTHHARDMSVVQWVMSLPDRSPKRSPHSCYSIEENPSERGIGMEDESSTNGSPPCVVELPKGLEGKLIVNSLNCKWFSLEVLKSCTSYFSSENLIGKGGSNRVYKGVLPNGKPIAVKVLKSSKEAWKDFALEVEIISSLEHKNITPLLGICVEDNALISVYDYLPKGSLEENLHGKKNENEAILSWEMRFNVAVGIAEALDYLHRETLKPVIHRDVKSSNILLSHGFEPQLSDFGLAIWGPTASSFLTQEDVVGTFGYLSPEYFMYGKVSDKIDAYAFGVVLLELISGREPICSEPCKGEESLVLWAKPIIESGNVKGLLDPNLEGKFDETQMQRMVLAASLCITRAARLRPKLNQILTILKGDEKVEYFLNSHGDDYEHSENQESIDDEVYPNSSAELHLSLALLGIDDDTTSYSCTDHSNVEHSKERWSRSSSFD 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0123 831 MobiDBLite consensus disorder prediction 418 446 - -
Lal9g0123 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Lal9g0123 831 PANTHER OS08G0249100 PROTEIN 176 810 - -
Lal9g0123 831 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 74 89 IPR023313 -
Lal9g0123 831 SUPERFAMILY UBC-like 2 127 IPR016135 -
Lal9g0123 831 SMART ubc_7 4 147 - -
Lal9g0123 831 CDD UBCc 3 126 IPR000608 -
Lal9g0123 831 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 176 810 - -
Lal9g0123 831 Gene3D Ubiquitin Conjugating Enzyme 1 130 IPR016135 -
Lal9g0123 831 SUPERFAMILY Protein kinase-like (PK-like) 465 755 IPR011009 -
Lal9g0123 831 Pfam Protein kinase domain 484 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0123 831 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 147 IPR000608 -
Lal9g0123 831 Gene3D Transferase(Phosphotransferase) domain 1 558 776 - -
Lal9g0123 831 SMART serkin_6 483 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0123 831 Pfam Ubiquitin-conjugating enzyme 5 126 IPR000608 -
Lal9g0123 831 ProSiteProfiles Protein kinase domain profile. 483 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0123 831 Gene3D Phosphorylase Kinase; domain 1 456 557 - -
Lal9g0123 831 CDD USP_Like 183 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0123 Lal-Chr9 812890 819414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0123 465 781 Trihelix Transcription Factor Family AT4G32710 44.343 2.64e-69 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal9g0123 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0123 - - lang:109355495 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0123 9 812890 819414 Lal9g0123 9 812890 819414 ECH
Lal9g0123 9 812890 819414 Lal21g0671 21 5215775 5219619 ECH
Lal9g0123 9 812890 819414 Lal17g0753 17 5396473 5399992 ECH
Lal1g0168 1 1063443 1066113 Lal9g0123 9 812890 819414 LSH