Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0108 ATGTTAGCGATCATGCACCACCAACAGCAACAACCCTCAACCACTTCCCTTAGGTCTCCACCCTCTCTTTCTCTCACTCCTCACCGCCAACAACACCTCCCTCTATGCCACTTGGAAAGAGTTCGTTTATCCGATATTGTGCCCTACGATGGGGCACCCGTGGCTCCTTATGTAAGGGCAGTGGATGCACTTTACGCCTCTCTCTTGAGACATAATGCTGTATTGATCGAATTAGGTACCGAGGATACTTCTCTCATCAGATATGGCTTGGAGGGTGCTAGGTTGTTTTTCAGAAGCAGGGTTCATCTTGGTGTTGCTCAAGGAAACCGTGGGGTTTACATGTACAGAGCTGGAAGGGCTTTGGAGGATTGGGATTCGTCTCCCCCTTGCATGTCTGATATTTTTAGATGCATGGGAAAGGCGTCTCGTTATGCCTTGTCTGCTATTGCAAGGCATCTGCGTCTTCGAAGCGATGTTTTTAACCATCTGCTTGATGATGCCCCATTGCCTGCTAATGAGGTGTCTTCATCAGTTCTTGTTGCAACTTACTCACATGCTTCTTTGCAAAATGGAAAAGGTGCTATTGGAGGCAGTAAGCCTAACATGAATGGTGAAGTTGAGAAGGGATTGTTGACATTGATTTCTACAGACACTCCTGGTCTTCAGGTATGTGACCCCAACGGCCGCTGGCATTTAGCAGACAGTGGGTCTGGACCTGGAGAACTTTTACTGATAACAGGCAAAGCGCTTAGCCATGCTACTGCAGGTCTTTGTCCTGCTGCATCATATAGAGCTTCTCCCGAATATTTTTTAGGTCCCAATAGCGGCGGAAGGACTTCTCTTGCATATAGGCTCATGCCACAGGGCAATGCTATATTAGACTGCTCTCCGATTGCAGCAGCTGGCCATGTTATTCCTCAAAGCTATGTTCCAATATCTGTAAGTCAGTTCATGGATGACCTTGCTGCCGAAGAACTGATAGATAGCAGATCTGATAGTGCTGATGTTGCTCAGAACAATGTGAACAGGGATCCATCATTAAGAAGCATTCTATCAGATCCTATGTCGGGCACATTCCTTGAAGATGCCATGTTTGTCTCATGCGGTCATTCATTTGGTGGTCTGATGCTGAGGAGAGTCATTGAAACATCAAGATGTACACTCTGCAACGCAGATATTGAGACCAGTTCTCTGATCCCTAATATTGCTTTAAGAGCTGCAGCTGCTGCTGTTAAGCATGAGGATGAACGAAGATTATTTCGTAATGCTGCTCTCCGAAAGCGGCGGAAAGAAATGGGTTACCAAATGGATTCAGTGAGAAGAGTGAACAGGGAAAACGGAGATTTTACTGCTACTGATGGACTCCAACGGGGAGTACAATATCCATTTTCGATAAATGAGAAAGTTATTATCAAGGGTAACCGGAGAACACCAGAAAAATTTGTTGGAAAAGAAGCTGTCATTACATCTCAGTGTCTCAATGGCTGGTATTTGCTCGAAATTATTGGAACCGGAGAGAGTGTCCGTCTGCAGTACCGTTCTCTTAGGAAGCTCTTAACTTCACCGACCACAGAGGACCAGTGTCCCTCACAGCCAATTCAAAATAGCAACTCTTAA 1617 0.4576 MLAIMHHQQQQPSTTSLRSPPSLSLTPHRQQHLPLCHLERVRLSDIVPYDGAPVAPYVRAVDALYASLLRHNAVLIELGTEDTSLIRYGLEGARLFFRSRVHLGVAQGNRGVYMYRAGRALEDWDSSPPCMSDIFRCMGKASRYALSAIARHLRLRSDVFNHLLDDAPLPANEVSSSVLVATYSHASLQNGKGAIGGSKPNMNGEVEKGLLTLISTDTPGLQVCDPNGRWHLADSGSGPGELLLITGKALSHATAGLCPAASYRASPEYFLGPNSGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLAAEELIDSRSDSADVAQNNVNRDPSLRSILSDPMSGTFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNADIETSSLIPNIALRAAAAAVKHEDERRLFRNAALRKRRKEMGYQMDSVRRVNRENGDFTATDGLQRGVQYPFSINEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLEIIGTGESVRLQYRSLRKLLTSPTTEDQCPSQPIQNSNS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0108 538 SUPERFAMILY Clavaminate synthase-like 126 318 - -
Lal9g0108 538 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 31 536 - -
Lal9g0108 538 Gene3D - 94 346 IPR027443 -
Lal9g0108 538 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 31 536 - -
Lal9g0108 538 SUPERFAMILY RING/U-box 347 413 - -
Lal9g0108 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 347 416 IPR013083 -
Lal9g0108 538 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0108 Lal-Chr9 682032 697905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0108 347 525 Plant U-box Gene Family AT5G05230 39.459 1.36e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0108 - - lang:109355513 1008.82