Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0101 ATGTATCACTCTCATTATGTGTCAGCCGGAGATTTTCCCAGTCCAACTGAACCATACAGTTATACCCAAAGAGCATTTCCATTGCCACCACTACCACCACCACCTCCACCTCCACCTCCGGTTCCCATAAAGAAAAGGGTCCTGTGGACTGAAGAAGAACATAGGTTATTTGTGTTTGGGCTTAGCATATATGGGAAGGGAAACTGGAAGGCTATTTCAAGAAATTTTGTTCCTTCAAAGACTCCAATTCAGATTGCTAGTCATGCCCAGAAATATTTTATTCGTCATGATGCTTCTCCTTCCAATCCCTCAAGAAAAAGAAAAAGAAGAAAAAGTATTCATGACATAACCATGCAAGAACCTCATCATCATTTCATTCATAGGGGTGTTCTTGCACCACCACAAGAACAACCACTTCCACAACCTAATCCACCAACCACAAATACTGATTCTAAGCTCATGGGTTACATGAACTCTCTTTCTCCTCTCCACAATTGCCATTTCATTAACCATGATAATGAATCATTATTGCAGCAACCACAAACACGTTACGTTGCACAGATGAACTTGAATCCACTGATCAGACAAACAGTTTATTTCAATAGATGGATATCAGAGTTAGGAGGATATAACCATTAA 639 0.4006 MYHSHYVSAGDFPSPTEPYSYTQRAFPLPPLPPPPPPPPPVPIKKRVLWTEEEHRLFVFGLSIYGKGNWKAISRNFVPSKTPIQIASHAQKYFIRHDASPSNPSRKRKRRKSIHDITMQEPHHHFIHRGVLAPPQEQPLPQPNPPTTNTDSKLMGYMNSLSPLHNCHFINHDNESLLQQPQTRYVAQMNLNPLIRQTVYFNRWISELGGYNH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0101 212 SMART sant 45 95 IPR001005 -
Lal9g0101 212 SUPERFAMILY Homeodomain-like 42 96 IPR009057 -
Lal9g0101 212 Gene3D - 48 98 - -
Lal9g0101 212 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Lal9g0101 212 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 44 95 IPR006447 GO:0003677
Lal9g0101 212 ProSiteProfiles SANT domain profile. 49 97 IPR017884 -
Lal9g0101 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 97 IPR017930 -
Lal9g0101 212 CDD SANT 49 93 IPR001005 -
Lal9g0101 212 Pfam Myb-like DNA-binding domain 48 93 IPR001005 -
Lal9g0101 212 PANTHER TRANSCRIPTION FACTOR KUA1 44 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0101 Lal-Chr9 658859 659588 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal9g0101 Myb_DNA-binding 7.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0101 - - lang:109354044 216.468