Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0100 ATGTCGCGTCAAACGACGTCGTCTGCTTTCACCAAATCCAAAACCCTCGACAACAAATATATGCTGGGAGATGAGATTGGGAAGGGAGCTTATGGTCGAGTTTTCAAAGGTTTGGACCTAGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGAATTTGAATCACAAAAACATTGTAAAGTATCTTGGATCCTTAAAGACAAAGAGTCACCTGCACATAATTTTGGAGTATGTTGAGAATGGCTCGCTTGCAAATATTATCAAGCCCAATAAATTTGGACCATTTCCAGAATCATTGGTTGCGGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTACATGAACAGGGTGTTATCCATCGGGATATTAAGGGTGCTAACATATTGACAACTAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGTGTTGCAACAAAGTTAACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACACCATATTGGATGGCCCCAGAGGTTATAGAAATGTCAGGTGTGTGCGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTGCCTCCTTACTATGATTTGCAGCCTATGCCGGCTCTTTTCCGTATTGTCCAGGATGAGCATCCTCCAATTCCTGATAGCCTGTCACCTGACATTACTGATTTTCTGCACCATTGCTTTCAGAAGGATGCTAGACAAAGACCTGATGCTAAAACACTGCTGTCTCACCCGTGGATTCAAAACTGTAGACGTGTCCTGCAGTCTTCTCTTCGCCACAGTGGAACGTTAAAAAATATAGAGGAAGATGATTCAGTAGATGCAGAAGTTTCTGGTGGTGATCACAAAAGTGCTGGTCAAAGCTCATTTTTGGAGAAAGAGGACTCTGCAAAAGAGTGTACAAATGTGGCTGCTGATGGTAGCAAGTCTCAAGAAGACAATGCTTCAGATTCTAATTTTCTCAATGAGAGAACAGAGAACAGAGGTGATGTTCCATCAGATCAGGTTCTCACCTTACCCATTCATGAGAAGTCGTTTCTAAAAACTGGTTCTAGCAAATTCTCTTCAAATAGAGTAATTAGTTCCGAGCTAACTGATGGTGATCATGAAATTTCGAAAGCTAAAGACTTTCATGAAGTCACGATGAATGGAGAAGTTGGGCCTCCAAAATCAAGGGGGGTGGCTAATAAGCTTGGAGGAAAACACAGTTCTATCAATGATGGCAATAAATCATTTGGTTTTGGACCAAAAGTTCAAGATAATGGTTCTGTAAAGGCAGTGAAGTTTCCGCATCATGTGGAAGGAAATGAGCTGAGCAGATTTAGTGACCCTCCAGGAGATGCCTACTTAGATGATTTGTTTCATCCATTACAAAACCAACCTGGGGAGGTTGCAGCTGAAGCATCCACATCTTCATCCACTTCAAATATGGTTAAAGGTAATGCATCTATGAATGTTGGTGGGGAAAATGACCTTGCCAAAGAGTTGAGAGCTACAATTGCTCGAAAGCAATGGGAGAAGGAGAATGAAATTGGACAAGCAAACAGTGGTGGGAACCTTTTACACCGAGTGATGATTGGTGTTCTAAAAGATGATGTTATTGATATAGATGGGTTGGTCTTTGACGAAAAACTTCCTGGAGAAAACCATTTTCCTCTACAGGTCGTTGAGTTCAGCAAATTAGTGGGCTCGTTAACACCAGAGGAATCAGAAGACGTGATTGTATCTGCATGTCATAAACTTATTGGTATATTTCACCAACGTCCAGAGCAGAAAATTGTCTTTGTTACCCAGCATGGATTACTTCCTTTGACAGACTTGCTAGAAGTTCCTAAAACACGCGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAACGCATGTCTTGTTGGATTGATTCCTGCAATCATGAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGTATGGAAGCAGCTTATTTTTTGCAGCAACTTTGTCAGTCTAGTTCCTTGACATTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAGGCTGATTATGCCAAGTACAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAAGTATTTAAGCTTCAGCAGTCAACACCCATAAATGATTTTTGTCGGATAGCTGCAAAGAATGGAATACTCCTTAGGCTTATAAATACTCTTTACAGCCTAAATGAGGCAACCCGACTCGCTTCTATGTCTGCTGGAGGTGGATATTTGATTGATGGTTCAGCTCAACGGGCACATTCTGGTATCTTGGATTCTACACATGCTTCTATTGTTCAGAATGAGGCACTGTTATCTTCAGTAGATCAGCAGGATCTACATAAAGTGAAGCGTGGAGTACTTGATCATCACTTAGAACCTTCACATGCTTCAACCTCCAATCCTCGGAGATCAGATTCTAATCACCCCATTGATATTGACAAGCCTCGATCTAGCAACGCAGCAGCTGAAGTTGCGTCACTGGAGAAGATTTCAAATCTAGCTTTCAGAGAATCTTCAGTAGGTACGTTAAAAGAGAGAGAGAATGTGGATCGTTGGAAATTTGATCCTTCTCGGGCGTATATTGAACCCAGACAGCAGCGTGTCAATATTTCTTCTACCAGGACATCAACAGATAGGTCTCCAAAATTGACAGAACCTGCATCAAATGGGTTATCAGTTACAGGAGCTACACGGCAAGAGCAAGTTAGGCCTCTACTTAGCTTGTTGGACAAAGAGCCACCATCTGGACGTTTATCTGGCCAGCTTGAGTATGTACGTCAGTTTTCGGGATTAGAAAGACAGGAAAGTTTACTCCCTTTGTTACATGCCTCGGAAAAGAGAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAAAATGCAAAAGAAAATGGAAATCTGGACTCCAGTGCTAGAGTGTCTCACAAAGTTGCTCCCAAGAAATTAGGGACTGAAGGATCTGCTTCCACATCTGGGATTGTATCTCAGACAGCATCAGGTGTACTGTCTGGTTCTGGTGTTCTAAATGCTAGACCAGGTAGTTCTACTTCATCTGGGATACTTTCCCACATGGTTTCATCATTGAATGCAGATGTTGCCAGGGAATACCTAGAAAAGGTGTCAGATCTTCTGCTTGAGTTTGCACAAGCAGACACTACAGTGAAGTCTTACATGTGTAGCCAAAGCTTGCTTAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTCTGTTGAAGATACTGAAGTGCATTAATTATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATATTTGATTCCGAATCTTGAACTCAAAGAAGGGTCTCTAGTCTTGAACGCCCTGTTCAATTTATGCAAGATAAATAAGAGAAGGCAGGAACAAGCAGCTGAAAATGGGATCATTCCCCATTTGTTGCAATTCATCACGTCAAACTCTCCTTTGAGACAATATGCATTGCCTCTGCTGTGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAAGATCAGATTTGGTCTGTGACTGCACTAGATTCCATTGCTATTTGCTTAGCCCATGACAGTGACAACAAGAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTAATGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATACTGGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATCAATACCACATTAGCTGTTAATGGGTTAACGCCATTGCTTATCGCAAGGCTTGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTCATCAAGGCTGTTTATGAGCACCACCCACAACCAAAGAAGTTGATAGTGGAGAATGAGTTACCTCAGAAACTTCAAAACTTGATAGGGGAAAGGAGAGATGGACAAGTATTGGTCAAACAGATGGCCACTTCATTACTTAAAGCTCTACACATAAACACTGTTTTGTGA 4170 0.4153 MSRQTTSSAFTKSKTLDNKYMLGDEIGKGAYGRVFKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSLKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHHCFQKDARQRPDAKTLLSHPWIQNCRRVLQSSLRHSGTLKNIEEDDSVDAEVSGGDHKSAGQSSFLEKEDSAKECTNVAADGSKSQEDNASDSNFLNERTENRGDVPSDQVLTLPIHEKSFLKTGSSKFSSNRVISSELTDGDHEISKAKDFHEVTMNGEVGPPKSRGVANKLGGKHSSINDGNKSFGFGPKVQDNGSVKAVKFPHHVEGNELSRFSDPPGDAYLDDLFHPLQNQPGEVAAEASTSSSTSNMVKGNASMNVGGENDLAKELRATIARKQWEKENEIGQANSGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENHFPLQVVEFSKLVGSLTPEESEDVIVSACHKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAIMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPINDFCRIAAKNGILLRLINTLYSLNEATRLASMSAGGGYLIDGSAQRAHSGILDSTHASIVQNEALLSSVDQQDLHKVKRGVLDHHLEPSHASTSNPRRSDSNHPIDIDKPRSSNAAAEVASLEKISNLAFRESSVGTLKERENVDRWKFDPSRAYIEPRQQRVNISSTRTSTDRSPKLTEPASNGLSVTGATRQEQVRPLLSLLDKEPPSGRLSGQLEYVRQFSGLERQESLLPLLHASEKRTNGELDFLMAEFADVSQNAKENGNLDSSARVSHKVAPKKLGTEGSASTSGIVSQTASGVLSGSGVLNARPGSSTSSGILSHMVSSLNADVAREYLEKVSDLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINYLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVLNALFNLCKINKRRQEQAAENGIIPHLLQFITSNSPLRQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDQIWSVTALDSIAICLAHDSDNKKVEQALLKKDAVQKLVMFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENELPQKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0100 1389 Gene3D Transferase(Phosphotransferase) domain 1 17 301 - -
Lal9g0100 1389 Gene3D - 571 798 IPR011989 -
Lal9g0100 1389 Gene3D - 1200 1387 IPR011989 -
Lal9g0100 1389 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lal9g0100 1389 SMART serkin_6 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0100 1389 SUPERFAMILY Protein kinase-like (PK-like) 17 268 IPR011009 -
Lal9g0100 1389 Pfam Protein kinase domain 21 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0100 1389 MobiDBLite consensus disorder prediction 907 930 - -
Lal9g0100 1389 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1348 - -
Lal9g0100 1389 MobiDBLite consensus disorder prediction 825 857 - -
Lal9g0100 1389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lal9g0100 1389 PANTHER MAP KINASE KINASE KINASE 2 1348 - -
Lal9g0100 1389 SUPERFAMILY ARM repeat 580 1279 IPR016024 -
Lal9g0100 1389 SMART arm_5 1174 1213 IPR000225 GO:0005515
Lal9g0100 1389 SMART arm_5 608 648 IPR000225 GO:0005515
Lal9g0100 1389 MobiDBLite consensus disorder prediction 323 342 - -
Lal9g0100 1389 PRINTS Tyrosine kinase catalytic domain signature 89 102 IPR001245 GO:0004672|GO:0006468
Lal9g0100 1389 PRINTS Tyrosine kinase catalytic domain signature 127 145 IPR001245 GO:0004672|GO:0006468
Lal9g0100 1389 PRINTS Tyrosine kinase catalytic domain signature 193 215 IPR001245 GO:0004672|GO:0006468
Lal9g0100 1389 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Lal9g0100 1389 ProSiteProfiles Protein kinase domain profile. 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0100 1389 CDD STKc_Cdc7_like 19 267 - -
Lal9g0100 1389 Gene3D - 1051 1199 IPR011989 -
Lal9g0100 1389 MobiDBLite consensus disorder prediction 285 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0100 Lal-Chr9 643547 657971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0100 1 1389 MAP Kinase Kinase Kinase AT3G13530 69.860 0.0 1915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lal9g0100 Pkinase 3.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0100 - - aprc:113864564 2364.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0074 2 429424 444721 Lal9g0100 9 643547 657971 LSH