Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0099 ATGTACTTTAGGAGAATACAGGCCAGAGACCGGAGATGGGATTTAGTGTTTCAACCATTGAAATACTGTTTCAGGCCAACATTCTCTGATCATGCATGCTTTCAATCTTTGGCCCCCAAGACCACCATTAAAGAATGCATATCACATGGTAGTATCATCAGAAGACGTCTTTTAGGTTCACATTCGTCAAAGTGTGCTTTGTCCACAAATAGTTGTACTAGTTTGGACAAAAGGCTTAGTTTATGGAGTACACATCTGCGTGCTTATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAGCATGTACATGTTAATGATAGAGCTAACCTTGATAAGGGACAGAATCGACAAGAGATGTCGGGGAAAAATCTCAAGTGCTGCAATGCACATGAGCAAATAGGAGAACAAGATCAAGAGGAATGGCTTAATAATGAGAAGCTTTCCATAGAAAGTAAGAAGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAACGAGTTTCTCAGAAGAATTGTTCCATGGGAGAAGATAAACATTTCATGGGACACATTCCCTTATCACATTAACGAACATACAAAAAGTCTTTTGGTGGAATGTGCTGCTTCCCATTTGAGACAAAATAAGTTTGCTTCGTCTTTTGGCACTCGCCTCACATCTTCGAGCGGGAGAATATTGCTTCAGAGCATTCCTGGTACTGAGCTCTATCGTGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTGTTGGTGCTTGATAATAGCATCATTGCTCCTTATGATGTTGATGATGATTCATCAGACTACGAGTCTGATGATGATAATGCAGACTCGGGAGAAGAAGGTTCAATAGTGTCAGAGTCTGAGGATGACAATGATGCTAGCAATGAAGAAGAGTGGGCTAGCAGTACTGAGGTAAAGTCAGATGCAAGTGATAATGAGGACGCACTTGCACATGCTGAAGCAGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAGAAGATTGCGTCCGTAGGATCAGAGAGTTCTGATTCATCTAAGTCTAATGATGCCAAGTCTTCTGGTAAATGTGGACACCAGCTAAGAAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTCAAGTTACAGCTGATGATAGGGTTGTACTGGGGAAGATACCGACATCTGATGGTCCAACTAAAGCTTATACTATTATACATGGCAGGCCTTTAACCAATGGTCAGAGAGGAGAGGTATATGAAGTGAATGAAGATCGAGTTGCTGTCATCTTGGATAATAATGAAGGCAGTGCCAATGAGGGTGAGGTGGAGAACCTTAATGACGAGCAAAGAAAACCAGCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCTTGATCCACAAGCACAGGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCATACCGAAATGAGTTTTTAAATAAGGTTGAAGAGATGTTTGACAAGTTATCTGGCCCCGTGGTGTTGATTTGTGGGCAGAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAATCTTGGACGTGCTTCTAAGCTGCCTTTGTCTCTGAAACGATTGACTGATGGATTTAAAGGGGCCAAGAGCTCGGAAGATGATGATGTTCAAAAGCTTTTCTCTAATGTTTTGTGTGTACATCCACCTAAGGATGATAATCTGCTGGCAACATTTAAGAAACAGCTTGATGAAGACAGGAAATTTGTGATTTCACGTAGCAATTTGAATGAACTAAGAAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTGAATGTAAATACCGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGCTGGGCAAAAAATCATTACTTGTCATCGTGCCTGCTTCCTTCTGTTAAAGGAGAACAATTGTGCCTCCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAAGGGCAAGAAGTTATATCACGGAAACCTTCTCATAACCTCAAGGCATGGAACCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCTGCCGTGGTACCTTCTGATGAAATAGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTTATGGAAACTTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACTGGGAAAACTCTAATGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTAACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTACTTGGTGCTCGAGGCGGTGCTTTTGAACATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTCATTCTTGGTGCAACAAACAGACCGTTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAACGAAGATTTTGAGAATAGTCCTGGCACAAGAAAATTTGGTTCCCGGTTTTGAGTATGACAAACTTGCTAAGTTGACTGAAGGATACTCTGGCAGTGACTTGAAGAACCTTTGTATTGCTGCTGCATATAGGCCTGTTCAAGAGCTCATAGAGAAAGAAAAAAAGGGAACCAATAATGGTACATCTTCAGTATTAAGGCCTCTTAATCTAGATGATTTTGTTGAGTCAAAAGCTAAGGTGGGGCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAATGGAATGATATGTATGGAGAAGATGGTAGTAGGACAAAATCACCATTTGGATTTGGGACCTGA 3114 0.4062 MYFRRIQARDRRWDLVFQPLKYCFRPTFSDHACFQSLAPKTTIKECISHGSIIRRRLLGSHSSKCALSTNSCTSLDKRLSLWSTHLRAYSSESDGRNASEDKHVHVNDRANLDKGQNRQEMSGKNLKCCNAHEQIGEQDQEEWLNNEKLSIESKKRESPFLTRRDKFKNEFLRRIVPWEKINISWDTFPYHINEHTKSLLVECAASHLRQNKFASSFGTRLTSSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDNSIIAPYDVDDDSSDYESDDDNADSGEEGSIVSESEDDNDASNEEEWASSTEVKSDASDNEDALAHAEAALKKVKAAVQKLVPYNIEEFEKIASVGSESSDSSKSNDAKSSGKCGHQLRKGDRVKYIGPSVQVTADDRVVLGKIPTSDGPTKAYTIIHGRPLTNGQRGEVYEVNEDRVAVILDNNEGSANEGEVENLNDEQRKPAIYWIHVKDIENDLDPQAQDCYIAVEALCEVLKSRQPLIVYFPDSSQWLHKSVPKSYRNEFLNKVEEMFDKLSGPVVLICGQNKVQSGSKEKEQFTMILPNLGRASKLPLSLKRLTDGFKGAKSSEDDDVQKLFSNVLCVHPPKDDNLLATFKKQLDEDRKFVISRSNLNELRKVLEEHQLSCTDLLNVNTDDVILTKQKAEKVVGWAKNHYLSSCLLPSVKGEQLCLPRESLEIAISRMKGQEVISRKPSHNLKAWNLAKDEFESNFISAVVPSDEIGVKFDDIGALEDVKKALNELVILPMRRPELFSYGNLLRPCKGILLFGPPGTGKTLMAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRTKILRIVLAQENLVPGFEYDKLAKLTEGYSGSDLKNLCIAAAYRPVQELIEKEKKGTNNGTSSVLRPLNLDDFVESKAKVGPSVAYDATSMNELRKWNDMYGEDGSRTKSPFGFGT 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0099 1037 MobiDBLite consensus disorder prediction 306 320 - -
Lal9g0099 1037 Gene3D - 743 1019 IPR027417 -
Lal9g0099 1037 MobiDBLite consensus disorder prediction 268 320 - -
Lal9g0099 1037 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 1035 - -
Lal9g0099 1037 MobiDBLite consensus disorder prediction 353 378 - -
Lal9g0099 1037 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 1035 - -
Lal9g0099 1037 MobiDBLite consensus disorder prediction 269 304 - -
Lal9g0099 1037 CDD AAA 782 915 - -
Lal9g0099 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 964 IPR027417 -
Lal9g0099 1037 Pfam ATPase family associated with various cellular activities (AAA) 784 914 IPR003959 GO:0005524|GO:0016887
Lal9g0099 1037 Gene3D - 916 1001 - -
Lal9g0099 1037 MobiDBLite consensus disorder prediction 354 371 - -
Lal9g0099 1037 Pfam AAA+ lid domain 939 972 IPR041569 -
Lal9g0099 1037 ProSitePatterns AAA-protein family signature. 887 906 IPR003960 GO:0005524|GO:0016887
Lal9g0099 1037 SMART AAA_5 780 917 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0099 Lal-Chr9 629359 643065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0099 739 979 Calmodulin-binding Proteins AT3G56690 31.301 4.22e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0099 - - gmx:100802939 1619.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0073 2 416286 432384 Lal9g0099 9 629359 643065 LSH