Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0091 ATGGCCTTGTTTTCAATTAATTTAAATATTCTTATACTTGTTGTGCTTATTATCTGTTTAACCAAACAAACACTGAGTAGTAGTTACCTTAGCCATGATGTAGTTGAAGAGCAAGAAGCAAACAGAGTGCATGGTTTACCAGGACAGCCACCTGTGAAATTCAAACAATATGCAGGTTATGTCACTGTCAATAAAACTCATGGAAGAGCATTGTTCTATTGGTTCTTTGAGTCCACTCAGAAATCACAAGATAAACCTCTTCTTCTATGGCTCAATGGAGGCCCAGGTTGTTCCTCTGTTGGTTATGGAGAAGCAGAGGAGGTAGGACCCTTCTTTCCTCAGAAAAGCAGCCACCCAAAGCTAAACTTGAATCCCTATTCTTGGAACAAAGCTGCAAATCTTTTGTTTGTGGAATCTCCGGTTGGGGTGGGATTCTCATACACCAACACCAGCAGTGATATAAATGAGCTTGGTGACACAATTACTGCCAAGGATTCACACAACTTTGTTATCAATTGGTTTAAGCGATTTCCACAGTTCAGATCACATGAGTTCTACATTGCAGGCGAAAGCTATGCAGGGCATTATGTTCCACAACTTTCTGAGCTCATTTTCGACAATAATCACAATCCAGCCAAGGAAGACTACATTAACTTTAAAGGGTTTCTGATTGGAAATGCATTGTTGGACGATGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCAGTGATATCTGATGGTTTATACCATAATATCACAACTGCATGCAACTTCAGTCTTCCAAACAGTTCAGATGCATGCACAATGGAACTTGATAAGTACTTTGATGTGTATAAGATTATTGACATGTATAGCTTGTATGCTCCAAGGTGTTTCAGCAACCAAAGTAGCACTACAAGGGAACCCCATGTCATCAAAGGCGTAGCTCCTCACACTTTTTCCAAATTTGATGGGTGGCATAAAAAACCAGCAGCAGGATATGATCCTTGTGCATCAGATTACACAGAAGTGTACCTAAATAGGCCAGAAGTACAAAAGGCATTGCATGCTAATGTCACCAAAATTCCCTATCCATGGACTCATTGCAGTGATAATATCACATTTTGGAATGACGCACCACATTCCATCCTTCCAGTCATAAAGAAGCTTATTGCCGGTGGTATTCGCATCTGGGTTTACAGTGGAGACACCGATGGAAGAATTCCTGTGACCGCAACAAGATACACACTTAGAAAACTTGGCCTCAATGTTGTTCAAGATTGGACTCCCTGGTATACTAGTAACCAGGTTGGAGGATGGAGTATTGTTTACAATGGACTCACATTTGTGACCATAAGAGGTGCTGGTCATCAGGTTCCTACATTCGCTCCTAAACAAGCTCTTCAACTAATTCAACATTTCTTGGTCAACAAGAAGTTACCACCTCATCCAATTTAA 1449 0.4051 MALFSINLNILILVVLIICLTKQTLSSSYLSHDVVEEQEANRVHGLPGQPPVKFKQYAGYVTVNKTHGRALFYWFFESTQKSQDKPLLLWLNGGPGCSSVGYGEAEEVGPFFPQKSSHPKLNLNPYSWNKAANLLFVESPVGVGFSYTNTSSDINELGDTITAKDSHNFVINWFKRFPQFRSHEFYIAGESYAGHYVPQLSELIFDNNHNPAKEDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTACNFSLPNSSDACTMELDKYFDVYKIIDMYSLYAPRCFSNQSSTTREPHVIKGVAPHTFSKFDGWHKKPAAGYDPCASDYTEVYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDAPHSILPVIKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLNVVQDWTPWYTSNQVGGWSIVYNGLTFVTIRGAGHQVPTFAPKQALQLIQHFLVNKKLPPHPI 482
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0091 482 Gene3D - 334 371 - -
Lal9g0091 482 Gene3D - 380 473 - -
Lal9g0091 482 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Lal9g0091 482 SUPERFAMILY alpha/beta-Hydrolases 38 477 IPR029058 -
Lal9g0091 482 PANTHER CARBOXYPEPTIDASE 12 481 - -
Lal9g0091 482 Gene3D alpha/beta hydrolase 37 297 IPR029058 -
Lal9g0091 482 Pfam Serine carboxypeptidase 47 473 IPR001563 GO:0004185|GO:0006508
Lal9g0091 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Lal9g0091 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Lal9g0091 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Lal9g0091 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Lal9g0091 482 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Lal9g0091 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 481 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal9g0091 Lal-Chr9 579921 585405 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0091 342 477 Calmodulin-binding Proteins AT2G22960 31.387 5.28e-16 74.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0091 K16297 - gmx:100797264 816.994
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0116 1 782654 786459 Lal9g0091 9 579921 585405 LSH