Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0082 ATGCAAACATCCATGGAAGACATATACATGAATGGGGAAATTACACTTCCAGGGTTCAGATTTCATCCCACAGAAGAAGAACTAGTTGATTTCTATCTTAAGAACATGGTTGGCAAGAAACTTCGTTATGATATCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGACTTGCCTGGGTTGTCAAAAGTAGGGGAAAGAGAATGGTACTTCTTTGTGCCAAGGGACAAAAAGCATGGTAGTGGAGGAAGGCCTAACCGCACCACTGAGAAAGGGTTTTGGAAAGCCACTGGTTCTGATAGGAGAATCGTGACTTTATCTGATCCTAAACGCATCATTGGGTTGAGAAAGACACTTGTTTTCTATGAGGGAAGAGCTCCAAGGGGAAACAAAACTGATTGGGTTATGAATGAATACCGTTTACCAGACAATTGCAACTTACCTAAGGAAATAGTGTTGTGCAAGATATATAGAAAGGCAACTTCATTGAAAGTGCTTGAGCAAAGGGCAGCATTAGAGGAAGAGACTAAGCAATTAGTTGGTTCCCCTGCATACTCTACGGACACAATGTCCTTTATTGAAGATCAAAACATGGTTCAACAACATGTTGTTCTTAAGAAGGAATGTGAAGGTAATGATGAAATGTTATCAGTGCCAATGCAAGAAAATACAAGGAGTGAATTGTCTATCATAGAAAACAAAATGACTTGTGGTACATCATTACAGTTACCCTTAGGAAATGATAAACTGCCAGAGCTCCAACTACCAATGATGATCACTGATTGGACCCAACTCACCCAAGATAACTTCTGGGCTCAGTTGAATAGTCCATGGCTTCAAAACTTGACACCTAGTTACTCCAACATCTTAAACTTTTAG 882 0.3991 MQTSMEDIYMNGEITLPGFRFHPTEEELVDFYLKNMVGKKLRYDIIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRRIVTLSDPKRIIGLRKTLVFYEGRAPRGNKTDWVMNEYRLPDNCNLPKEIVLCKIYRKATSLKVLEQRAALEEETKQLVGSPAYSTDTMSFIEDQNMVQQHVVLKKECEGNDEMLSVPMQENTRSELSIIENKMTCGTSLQLPLGNDKLPELQLPMMITDWTQLTQDNFWAQLNSPWLQNLTPSYSNILNF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0082 293 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Lal9g0082 293 Gene3D NAC domain 24 164 IPR036093 GO:0003677|GO:0006355
Lal9g0082 293 SUPERFAMILY NAC domain 6 160 IPR036093 GO:0003677|GO:0006355
Lal9g0082 293 ProSiteProfiles NAC domain profile. 15 160 IPR003441 GO:0003677|GO:0006355
Lal9g0082 293 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 293 - -
Lal9g0082 293 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 13 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0082 Lal-Chr9 536948 538374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0082 10 285 NAC Transcription Factor Family AT2G17040 60.498 7.22e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal9g0082 NAM 2.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0082 - - gmx:732555 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0082 9 536948 538374 Lal9g0082 9 536948 538374 ECH
Lal1g0100 1 685606 687518 Lal9g0082 9 536948 538374 LSH