Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0074 ATGGAGTTTGATTCTGAAAACTTGACTTCATCTGACTTGTCTCCCGTCTTCGAAGAACCTCAACCGGAGGAGCTTCATCACCGCAAGCCTCGTCTCGGCCGCAAACCTAAGAAACGCCGTCGTTATGCTACGGAAACCGGATCAAGTTCAGGTAATTTTACTACTGATAACAATTTGGTTGTTGAGGATAGTGAATTTAAGGGGATTTTGGAAGGGAATGGTTCTGCTGCTGTGAATTCGGGAGTGTGCGCTGAATTAGGTTCTGAATTTGATAGAAGCTTAGGTTTTGGAAATGGGAACTCAAATGGGAGTGATGTAATTCAAGTAAGGGTAATTTCGTCTGAGGAGAGTTTGGATCATAAGAGCGTGGAACCTAATGGGAATGGGCTTGATTTGAATGCTAGGATTAATTTGAATCTGAATGAAGGGTGTACTTCACCTTTTAATAACACTGAGGAGGATGGTCGTTTGAAGAGAGGGGATTCAATTGATTTGAATTTCGATGTGGATAATGAGGAGGATGGTGGCAACCGGAGTGTGTGTTATTTGGGCCGTTCGGGAGGGCTAATGCTGATGGAGGATTGTAAGATTGATTTGAATGTAGATGTAGGCGAAGAAAAGGGTGATGATGTGGATGGAAATGGACGTTCCGAGTTGGATACTTTGTTTGATAAGATAGATCAGACTGATAATATTAATCAGAAACCTATGGAAGGTGATGATATGCATGTTAATTTGAATGATGTCTCCAATGCTAACAAGTCTGATGCCATTCATGTGTCCACAGAACGTGCAGCTTTAGGTGCAACCACATGTTTGATTGAGGAAAGGGAAGGTGATGATGCCAATGGAGACACGCCAGCTATTGAGTCTCTCCAGGTTACAAATGTAGTTTCTGCTAAAGATTGTGATCACATGGAGGTTCAACAAATTGATAACAGTCCTTCTGAATTCCAAGGAAGTAGCCAGAGGAAGAGAAGAAAAGTATCAAATAATGGAAAATCCACAACAGAGACAATTTTAAGGAGGAGTTCTCGCCAGGCATCGGCTAGAAAACAGGTTTCAGGCACCATAGCGTTGCAGGAGATGTATGACCCTTTGTTGTCTGTGGTACCCAGTTCCTTAACAGAAGAAAAACTTGTAACCTCTGGTGATGAGAAATATGAGCCGTGCAATGTTCCTCCACCGAAATTGCAATTACCCCCTTCTTCTCAAAATTTGAATTTAGATGACGTTCCTGTTCTTGAAATTTTTTCTATTTATGCTTTTTTAAGATCTTTTAGTACTTTTTTATTTTTGAGTCCATTCGAATTGGAGGATCTTGTTGCCGCAGTGAAGTCTGAAACCCCCAGTATGTTATTTGACAGCATTCATGTTTCTATTTTGCAAACTTTGAGAAAGCATTTGGAATATCTTTCCAGTGAGGGTTGTCAATCTGCAGCCGATTGCCTGAGGAATCTTAACTGGGATTTCTTGGACTTGGTCACATGGCCCATTTTCATGGCCGAGTACCTTCTGATTCATGCCTCAGGATTTAAAACTGCTTTTGATCTTAACCACTTAATGTTCAGAACTGACTACTGCAAACAACCTGTAAATGTGAAGGTTAAGATACTGCAGTACCTTTGTGATGATACGGTTGAAGTGGAAGCCACAAGGTCGGAGCTTAACAGAAGATCTTCAGCAAACGAGGTTGATATGGGCTTTGATCAGAATATGTATTTTGACACTGGTAAGAAAAGAAGAGCTGTAACCGATGTTTCTGGTGGTTCTTGTTTGACTGAGGAGATTGTGGATGATACAACTGACTGGAACAGTGATGAGTGCTGCCTCTGTAAGATGGATGGAAGTTTAATATGCTGTGATGGTTGCCCTGCTGCATTCCACTCAAGGTGTGTGGGAATTGCAAGTGACAATCTGCCCGATGGCGACTGGTATTGCCCTGAGTGTGCAATTGGACCACACAGGGCTTGGACAAAATCACGTAAGTCACTTCGAGGAGCAGACTTGTTGGGGATTGATCATCATGGCCGTCTTTATTTTAACAGCTGTGGTTACCTGTTAGTGTCAGACTCATCTGGTACAGATTCCTTGTTCAGTTATTACCACAAAAATGATATATATGTTGTAGTTGAAGTTCTAAAGTCTATGGGTACTTTGTATGGAAGCATATTAATGGCTATTTATGAACATTGGGATATCCCTGCTAACTTAAGTGCTGGGACTAGTAACTTGGTAGTCTTTAATAAAAGTTCCTGCAAAAACGTGCATATGAGCGGAAAGAATTATGCTAGTTTAGACAATAATCTGGCTGATGATCAAAGAAAGTTGGATGAAAATTCAACTGTTGATTGTTCTACTTATCCTGGCCAAGAGTTTCCAAAAGCTGGGATCCGCTTAGATTCAATGACAACTATAGAAAGTCCTTGTGTTGCTTCAGAAGGGTCAGCTGATACCACACAAATGAGATCAGGGATTGAGAATGTTCAAATGCCTGGACTTTATGGTTCCACTAGATCCGATGAATCCTTGAATCAGTCTGGAAGACCAGGAAAACATCATCCAGTTGGTGATTGTTCTTTGACATCTTCCAGCTTAGATGTGGGGCATAAAATAAACTTAAGTTCTGTGGGTGCTAGCTGTACCCCCTCCACTGACAATAAGGATACTTCAGATGTGCCTTGTGGAATTAACTACCTAAACTACTACAGCTTTGCCCGAACAGCCGCATTAGTTGCACAAGAGTTGATGTGTAAGTCACCTGAAAAGAATAATAAGGATTATGCAATGTCTGATGAGGACATAATATCGGAACAAGGAAAGACCATTATGAAGAAATCTTCAAACTTTTGTTGGCCAAGCATTCAAAATCTGAATGCTGCTGCTGAAAAGGAAAAATGTGGGTGGTGCTTTTATTGCAAACTTGCTAATGATGACAAGGATTGCTTGTTTAATGATGTGATGAAGTCTGTTCGGCAAGTGTCGAATAATACTTTAGTTGGGCTTCAATCCAGGAAGATCCAGAATGGACATCTTACAGCTATCATATGTCACATTGTTTCCCTTGAGGACCGATTACGTGGGCTTTTGTTGGGTCCATGGTTGGACCCTCATCAAACCAATCATTGGCATAAGGAGCTTATGAAGACATCTGATTTTCTTCCTGTTAAACGATTATTGCTCCTTTTAGAATCCAATCTGCGGCATTTTGCACTCTCAGCAGATTGGTTGAAGCATGCAGATTCAGTTACTACCATGGGATCATCTACCCATATTGTGGTCAGTTCATCACGCACATCTTCAAGGCATGGTATTGCAAGGAGAAGGGCTAGGTATTCAGATATTGGGTCCAATTCATCTTCTAAGACTACTAGTGGTTTGGGATTATTTTGGTGGAGAGGTGGAAGGCTTTCCCGACAATTGTTTAATTGGAAGTATTTGCCTCGCTCCTTGGTTACCAAGGCTGCTAGACAAGCTGGGTGTACAAAGATACCAGGCATTCTCTATCCTGAGAATTCAGACTTTGCGAGGAGAAGCAAATGTGTAGTCTGGCGAGCTGCTGTTGAAAGGTCAACAAGTGTTGAGCAGCTTGCTTTACAGGTTAGAGAGCTTTATTCTAACATAAAGTGGCATGATATTGAGAATAGCCATCCTCAATATGTGCTGGACAAGGAATCTAAAAAGTCAATCAGGCTTTTCAAAAAAGTAATTGTACGCAAGAAGTGCACTGAAGGGCAATCTGTGAAATATCTTCTTGATTTTGGGGGGAAGAGAAGGTCCATACCAGATATCATTGTCAAACATGGTTCTTTGTTGGAAGAACCCTCAAGTGAGAGGAAAAAATATTGGCTAGATGAATCTTATCTTCCCTTGCATCTTTTGAAGAATTTTGAGGAAAAAAGAATTGTCCGAAAGTCCACTGAAAAGAAACATGGAAAACTTATTGAGATTGGTAGAGTAAATAAGAGGATTCCTCGGGAAAGTGTTTTTTCATATTTGTTCTCTAAAATGGAGAAATCTGATTGTCAACAGTGTGGCCACTGCAACAAAGACGTTCTAATCAGGGAAGCTGTGAGCTGCCTTCATTGCAAAGGGTATTTCCATAAGAGGCATGCCAGGAGATCGGGTGGTACAAGGACTACTGGATGCACTTACTCATGTCATAGATGCCAAGATGGGATGTGTGTAAAGACTAATAATACTAACAGAAGGAAAGATCACTCAAAACTGCAGAAGATTCAATCACAGAAATGTGGAAATGTTCCCTCACTTTGTAAATCAGTAAACCTTAAAGGTAATAAAAAGACATTGAGTAAGGTGCGGCAGGTAAGATCTCAAACCAATAAGAAGATCCCACCAAGTTTACCTCTTCGCCGTTCTGCTAGGAATGTCAAGTCCTTGTATCTGCAACATCAAATGAATGAAGGTCATAAAAAAGGAATACAGGGTAAAAAGAATGTAGGGCGTAAAAAAAGGAAGCAATATAAATCCAAGAAGCTGACCTCTCAGAAGTCCGATTCAGTTACTGCTCAACTCAAGAAGTTGGCAGTAACTACTGAGCGCAAGAAAAGAACGAACATCTGTACCAGTTACTGGCTTAATGGTCTTTGGTTGTCTAGAAAGCCAAATGATGAGCGAGTAATGTTGTTTAGGGAGAAAAAGCATGTTGTCTTCTCTGAAGATTTTCCTGGCACCCTTGACCATTGTAAATGCCGCCTTTGCTGTCAAGATGGATGTACTTCAAATTATATTGCTTGTGGAACATGTGGAGATTGGTATCACGGCGATGCTTTTGGACTTACTCTTGACAATGCCAGACAACTTATTGGATTTAGGTGCCATGTTTGTCGTGATAGGGCTGCTCCCGTCTGCCCCCATATTATTAATCCATTCCCTCACACTGAAAGCAATGTGGTAACTGAGTGTGCAGAGGAATCGTCTAAGCCTATTTCTCTCCTACCTTTGAGTGAGAATGATATAGATCGGCCCTTTACGCACGTCTATACTAGGAGGCCCAAACATGGGATAAGGAGGGATGGAAGAAGGGAGGAGGGTGGGGGTGGAAATTCAAAGAGGGGATATTTTGGACTACAGCAAGTGGTCCTTAACACAGAGAGTAAGAATGAGGGAGAGCAGGAAGATGGAATTCATAACCAACTCTCCACCTGTGTTGCCAGTATTGGAGGGGAGGAAGATTTGGGAATCACACCATGA 5214 0.4141 MEFDSENLTSSDLSPVFEEPQPEELHHRKPRLGRKPKKRRRYATETGSSSGNFTTDNNLVVEDSEFKGILEGNGSAAVNSGVCAELGSEFDRSLGFGNGNSNGSDVIQVRVISSEESLDHKSVEPNGNGLDLNARINLNLNEGCTSPFNNTEEDGRLKRGDSIDLNFDVDNEEDGGNRSVCYLGRSGGLMLMEDCKIDLNVDVGEEKGDDVDGNGRSELDTLFDKIDQTDNINQKPMEGDDMHVNLNDVSNANKSDAIHVSTERAALGATTCLIEEREGDDANGDTPAIESLQVTNVVSAKDCDHMEVQQIDNSPSEFQGSSQRKRRKVSNNGKSTTETILRRSSRQASARKQVSGTIALQEMYDPLLSVVPSSLTEEKLVTSGDEKYEPCNVPPPKLQLPPSSQNLNLDDVPVLEIFSIYAFLRSFSTFLFLSPFELEDLVAAVKSETPSMLFDSIHVSILQTLRKHLEYLSSEGCQSAADCLRNLNWDFLDLVTWPIFMAEYLLIHASGFKTAFDLNHLMFRTDYCKQPVNVKVKILQYLCDDTVEVEATRSELNRRSSANEVDMGFDQNMYFDTGKKRRAVTDVSGGSCLTEEIVDDTTDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIASDNLPDGDWYCPECAIGPHRAWTKSRKSLRGADLLGIDHHGRLYFNSCGYLLVSDSSGTDSLFSYYHKNDIYVVVEVLKSMGTLYGSILMAIYEHWDIPANLSAGTSNLVVFNKSSCKNVHMSGKNYASLDNNLADDQRKLDENSTVDCSTYPGQEFPKAGIRLDSMTTIESPCVASEGSADTTQMRSGIENVQMPGLYGSTRSDESLNQSGRPGKHHPVGDCSLTSSSLDVGHKINLSSVGASCTPSTDNKDTSDVPCGINYLNYYSFARTAALVAQELMCKSPEKNNKDYAMSDEDIISEQGKTIMKKSSNFCWPSIQNLNAAAEKEKCGWCFYCKLANDDKDCLFNDVMKSVRQVSNNTLVGLQSRKIQNGHLTAIICHIVSLEDRLRGLLLGPWLDPHQTNHWHKELMKTSDFLPVKRLLLLLESNLRHFALSADWLKHADSVTTMGSSTHIVVSSSRTSSRHGIARRRARYSDIGSNSSSKTTSGLGLFWWRGGRLSRQLFNWKYLPRSLVTKAARQAGCTKIPGILYPENSDFARRSKCVVWRAAVERSTSVEQLALQVRELYSNIKWHDIENSHPQYVLDKESKKSIRLFKKVIVRKKCTEGQSVKYLLDFGGKRRSIPDIIVKHGSLLEEPSSERKKYWLDESYLPLHLLKNFEEKRIVRKSTEKKHGKLIEIGRVNKRIPRESVFSYLFSKMEKSDCQQCGHCNKDVLIREAVSCLHCKGYFHKRHARRSGGTRTTGCTYSCHRCQDGMCVKTNNTNRRKDHSKLQKIQSQKCGNVPSLCKSVNLKGNKKTLSKVRQVRSQTNKKIPPSLPLRRSARNVKSLYLQHQMNEGHKKGIQGKKNVGRKKRKQYKSKKLTSQKSDSVTAQLKKLAVTTERKKRTNICTSYWLNGLWLSRKPNDERVMLFREKKHVVFSEDFPGTLDHCKCRLCCQDGCTSNYIACGTCGDWYHGDAFGLTLDNARQLIGFRCHVCRDRAAPVCPHIINPFPHTESNVVTECAEESSKPISLLPLSENDIDRPFTHVYTRRPKHGIRRDGRREEGGGGNSKRGYFGLQQVVLNTESKNEGEQEDGIHNQLSTCVASIGGEEDLGITP 1737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0074 1737 MobiDBLite consensus disorder prediction 1 57 - -
Lal9g0074 1737 ProSitePatterns Zinc finger PHD-type signature. 609 650 IPR019786 -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 310 349 - -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 333 349 - -
Lal9g0074 1737 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1550 1622 IPR013083 -
Lal9g0074 1737 SMART testlast3 411 471 IPR018501 -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 1 16 - -
Lal9g0074 1737 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 4 1632 - -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 1673 1693 - -
Lal9g0074 1737 Pfam PHD-finger 609 651 IPR019787 -
Lal9g0074 1737 ProSiteProfiles DDT domain profile. 411 471 IPR018501 -
Lal9g0074 1737 SUPERFAMILY FYVE/PHD zinc finger 585 651 IPR011011 -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 831 845 - -
Lal9g0074 1737 PANTHER PHD FINGER FAMILY PROTEIN 4 1632 - -
Lal9g0074 1737 Pfam DDT domain 416 467 IPR018501 -
Lal9g0074 1737 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 668 IPR013083 -
Lal9g0074 1737 SMART PHD_3 608 651 IPR001965 -
Lal9g0074 1737 SMART PHD_3 1568 1617 IPR001965 -
Lal9g0074 1737 CDD PHD1_AIRE 608 650 - -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 831 858 - -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 1483 1498 - -
Lal9g0074 1737 MobiDBLite consensus disorder prediction 1474 1503 - -
Lal9g0074 1737 SUPERFAMILY FYVE/PHD zinc finger 1569 1623 IPR011011 -
Lal9g0074 1737 ProSiteProfiles Zinc finger PHD-type profile. 606 653 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0074 Lal-Chr9 441973 456652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0074 28 1627 PHD Transcription Factor Family AT5G12400 40.267 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lal9g0074 DDT 7.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0074 - - lang:109353160 2558.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0074 9 441973 456652 Lal9g0074 9 441973 456652 ECH