Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0066 CATTTATATATTGTAACCACTAAGCTGCCCACACTGCCATCTAATACTATTTTCTTTTTCTTTAGTAAAAGAGAAATGGAGATAGAGCAAGACTATACTTCCAATGGCAATAGCAGTGTTACAAATATAGATTATGAAATGAGAATAAGAGATAATAAGAAAGGAATGATGTATCTTGTGTGGGAAGAGTTGAGTGTTGTGGTTCCAAATTTTGGGAATGGACACACTAAGAGGTTGCTTAATGGGTTGAGTGGATATGCAGAACCTAATAGAATCATGGCTATAATGGGTCCTTCTGGTTCTGGAAAATCTACTCTTCTTGATGCATTGGCAGGTAGACTCTCCAGAAATGTTATCATGTCTGGAAAGGTGCTTTTAAATGGAAAGAAGAGAAAATTAGACTGTGGGGGTGTAGCTTATGTGACCCAAGAAGACATATTGTTGGGAACACTAACAGTTAGAGAGACAATTTCATACTCAGCTAATCTAAGGCTTCCAGCTAGCATGACCAAAGAAGAGATAAATGACATTGTAGAAGGAACAATTATGGAGATGGGTCTTCAAGAATGTGCTGATAGGATTTTAGGAAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAAGAAAAGACTAAGCATAGCACTTGAAATCCTCACAAGGCCTAACCTCTTGTTCCTTGATGAACCCACCAGTGGTCTTGATAGTGCTTCAGCATATTTTGTTGTACAAACTTTGAGAAACATAGCCCATGATGGCAAGACTGTTATCTCTTCCATACATCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATGATCTCTTTCTGCTCTCTGGGGGTCAAACTATATACATTGGACCAGCTGAAAGGGCACTTGAGTTCTTTGCCAAAGCAGGATTTCCTTGTCCAAGTAGAAGAAATCCTTCCGACCATTTCCTACGTTGTATTAATTCAGACTTTGACACTGTCACAACGGCTATGATGACCTCCAAGAAAATGCATGAGCCAAAATCAGAAGCATCATTGATGAACTTAAAAACTGAAGAAATCAAAGTGAAACTCATTGAGAAATACAGATGGTCAGAATATGCAACAGCTGCAAGGGCAAGAATCAAAGAAATCTCAAATACTGAAGGAGATGATGGTGAAAGTAAAAGCAAGAGCCAAGCCAAATGGTGGAAGCAACTATCAACATTGACTAAGAGATCTTTCGTGAACATGTGCAGAGACGTGGGGTACTATTGGATAAGGGTAACAATCTATATTGCCTTATCTGTGTGTGTTGGTACAGTCTTTTTTGAAGTTGGAACAAGTTATAATGCAATTTTTGCAAGAGGGGCATGTGGCGCTTTTATTTCAGGTTTCATGACATTCATGTCTATAGGAGGCTTCCCATCCTTCATAGAAGAAATGAAGGTGTTTTCCAAAGAAAGGATTAATGGGCACTATGGAATTGCAGTGTACATTCTCTCAAATTTTCTGTCTTCCTTTCCCTTTGTGGCAATGATGTCCATTGCTAGTGGCACTATAACCTATTATATGGTTAAGTTTCGTCCTGAGTTCTCACATCTTTTGTATATCTGTCTTGATCTTATTGGCTGCATTGCCATTGTGGAGAGCTCCATGATGATTATAGCTTCACTAGTTCCCAATTTCCTCATGGGATTGATCATTGGAGCAGGATATATAGGTGTAATGATGATGACTGCGGGCTATTTCCGTCAGATCCATGATCTTCCTAAAATCTTCTGGCGTTACCCAATTTCATACATCAATTTTAGTGCATGGGGATTGCAGGGAGCTTTCAAGAATGACATGATTGGTCTGAAGTTTGATCCATTAATACCTGGTGGCCCAAAACTAGAAGGAGAAATAATCCTCACAACCATGCTTGGTATGAGAGTTGATTATTCAAAATGGTGGGACTTGGCTGTAATCATAATCATCCTCATAATGCTTAGAGTTCTCTTCTTTTTTGTTCTCAAATTTAAAGAGAGAGCTTCACCTTTAGTTCACAGTATCTATGCAAAACAAGCTCTGCAATGCATGAAGAAGCGACCTTCATTCAGGAAAGTACCACCATCTTTCCCTTCCAAAAGGCACCAATCACTGTATCCTATGTCTTCTCAAGAGGGTCTCACTTCCCCTATTCATTAG 2154 0.3914 HLYIVTTKLPTLPSNTIFFFFSKREMEIEQDYTSNGNSSVTNIDYEMRIRDNKKGMMYLVWEELSVVVPNFGNGHTKRLLNGLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGKVLLNGKKRKLDCGGVAYVTQEDILLGTLTVRETISYSANLRLPASMTKEEINDIVEGTIMEMGLQECADRILGNWHLRGISGGEKKRLSIALEILTRPNLLFLDEPTSGLDSASAYFVVQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYIGPAERALEFFAKAGFPCPSRRNPSDHFLRCINSDFDTVTTAMMTSKKMHEPKSEASLMNLKTEEIKVKLIEKYRWSEYATAARARIKEISNTEGDDGESKSKSQAKWWKQLSTLTKRSFVNMCRDVGYYWIRVTIYIALSVCVGTVFFEVGTSYNAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFSKERINGHYGIAVYILSNFLSSFPFVAMMSIASGTITYYMVKFRPEFSHLLYICLDLIGCIAIVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRQIHDLPKIFWRYPISYINFSAWGLQGAFKNDMIGLKFDPLIPGGPKLEGEIILTTMLGMRVDYSKWWDLAVIIIILIMLRVLFFFVLKFKERASPLVHSIYAKQALQCMKKRPSFRKVPPSFPSKRHQSLYPMSSQEGLTSPIH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0066 717 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 54 712 - -
Lal9g0066 717 SMART AAA_5 89 288 IPR003593 -
Lal9g0066 717 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Lal9g0066 717 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 54 712 - -
Lal9g0066 717 CDD ABCG_EPDR 56 285 - -
Lal9g0066 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 297 IPR027417 -
Lal9g0066 717 Pfam ABC-2 type transporter 260 330 IPR043926 GO:0140359
Lal9g0066 717 Pfam ABC transporter 80 231 IPR003439 GO:0005524
Lal9g0066 717 Gene3D - 46 298 IPR027417 -
Lal9g0066 717 MobiDBLite consensus disorder prediction 689 717 - -
Lal9g0066 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 303 IPR003439 GO:0005524
Lal9g0066 717 MobiDBLite consensus disorder prediction 700 717 - -
Lal9g0066 717 Pfam ABC-2 type transporter 394 603 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0066 Lal-Chr9 399492 404939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0066 12 261 Acyl Lipid Metabolism Gene Families AT1G54350 32.168 8.92e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0066 K05681 - gmx:100788651 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0066 9 399492 404939 Lal9g0066 9 399492 404939 ECH
Lal2g0046 2 267950 273348 Lal9g0066 9 399492 404939 ECH
Lal20g0100 20 645933 650082 Lal9g0066 9 399492 404939 ECH
Lal2g0047 2 274798 280516 Lal9g0066 9 399492 404939 LSH