Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0055 ATGGGAATCCACGAAGAAAGCGAAACCAGACACAAAATACCACCTGCAGTTGCCATCCACCGACGTTTCTTTCTCCACCCCATCCAAATTGTTAGGTTTGGATTTCACTTCATCTCGAACAAAATGATGAGGCTTCAGACATATGCCGGTCTTAGTGTGATTGCAACTCTGGCTGTTGCATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTTTATCTTGCAACTTCCAAGATCAGTTTGGTGCTTCTTCTCAACATGGGTCTGGTCATCATGTGTGTTCTATGGCAGTTAACCAAAATGATTTTCCTTGGTTCCCTTCGAGAGGCTGAGATTGAGAGGCTTAATGAGCAATCTTGGAGGGAGATTGTGGAAATCCTCTTTGCAATTACTATCTTTAGACAGGACTTCTCTGTTACATTTCTTGCGATGGTCACAACACTTTTGTTAATTAAGGCTTTGCATTGGTTGGCTCAGAAGAGACTCGAGTACATAGAGACCACTCCTTCTGTGACCAAGTTGTCCCATGTTAGAATTGTATCTTTTATGGGTTTCCTTTTTCTTCTAGATAGCCTCTTTTTGTATAGTTCTGTGAAGCATTTGATACTAACTTGGCAGCCTTCAGTTTCACTTTTCTTTGCTTTTGAGTACATGATACTAGCAACAACTACACTGTCAATTTTTGTAAAATATATTTTCTATGTCAGTGACATGCTTATGGATGGACAATGGGAAAAGAAACCGGTCTTCACCTTTTACCTTGAACTTATTAAGGATTTGCTTCACTTGTCCATGTACCTGTGCTTTTTTCTAGTAATTTTCATCTTTGGCGAAGGAAATGATGAAAACAACCTTTTCTTGCTCTCATCATTTCCTATGCAAAAAAACTATGGAGTTCCTTTGCACTTAATAAGGGAGCTGTACGAGACATTTAGGAACTTCAAAATTCGTGTTGCAGATTACATACGATATCGTAAGATTACTTCAAACATGAATGATCGGTTTCCCGATGCCACACCTGAAGAGCTTAATGCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACTACTGCAAAGAAGCTTATATGCGGGCATCTTTTTCATGTTCATTGCCTGCGATCATGGCTAGAACGGCAGCATACCTGTCCTACTTGCAGAGCAATGGTTGTACCAGCCGAAAATGGGACAACTTCTGCTGGAGGACTGCAAGCTTCACAGTCAGATGCTCATCGACATGTGAGACAGGGCTTGGTTATTGTTGTTGTATTAAAACCTAGAAATGGAACAGGGACAAGCGCTGGAAGCACATCTCAAGCTGAAGTTGGCAACGGGATGGCAACTGATAATTTGAATCAGCATCAAGCGAGACTCCAAGCTGCCGCTGCAGCAGCTTCTGTGTATGAGAAGTCTTATGTTTACCCCTCTGCAACTTCTTTAGCATGTTCTCCAGGGTACACTCAGTATCCTCCAGTTCAAATATCTGTGCCTGAATCTTCAAGTACTGAGCTTAATAGAGAACAAGCATCCAGTAGTAAACAAGCACAAACACACTTTGTTATCCCTGGTGGATCAACGAATGCATCTTCTCCTCCAATGGGAAATTTTGATTCTCTGGTGGAAGCTCAAAGAAAACTTCTTCAATTACAGATTGAGATTCTGCAAAATCAGCTCCAACTTCTGCAGAAGACAAATGTTGACAAAAGTGTGGATGAGGGCATATCATTATCAGATAGCAGAGGCAAAAACATAGCTTCTTCATCTATATCTAACCATGAGGAGATTTAA 1800 0.41 MGIHEESETRHKIPPAVAIHRRFFLHPIQIVRFGFHFISNKMMRLQTYAGLSVIATLAVAYHAFNSRGQFYPAMVYLATSKISLVLLLNMGLVIMCVLWQLTKMIFLGSLREAEIERLNEQSWREIVEILFAITIFRQDFSVTFLAMVTTLLLIKALHWLAQKRLEYIETTPSVTKLSHVRIVSFMGFLFLLDSLFLYSSVKHLILTWQPSVSLFFAFEYMILATTTLSIFVKYIFYVSDMLMDGQWEKKPVFTFYLELIKDLLHLSMYLCFFLVIFIFGEGNDENNLFLLSSFPMQKNYGVPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRAMVVPAENGTTSAGGLQASQSDAHRHVRQGLVIVVVLKPRNGTGTSAGSTSQAEVGNGMATDNLNQHQARLQAAAAAASVYEKSYVYPSATSLACSPGYTQYPPVQISVPESSSTELNREQASSSKQAQTHFVIPGGSTNASSPPMGNFDSLVEAQRKLLQLQIEILQNQLQLLQKTNVDKSVDEGISLSDSRGKNIASSSISNHEEI 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0055 599 PANTHER RING ZINC FINGER PROTEIN 298 436 - -
Lal9g0055 599 PANTHER RING ZINC FINGER PROTEIN 42 278 - -
Lal9g0055 599 PANTHER - 42 278 - -
Lal9g0055 599 PANTHER - 298 436 - -
Lal9g0055 599 MobiDBLite consensus disorder prediction 583 599 - -
Lal9g0055 599 CDD RING-H2_synoviolin 350 391 - -
Lal9g0055 599 SMART ring_2 353 390 IPR001841 -
Lal9g0055 599 SUPERFAMILY RING/U-box 333 397 - -
Lal9g0055 599 MobiDBLite consensus disorder prediction 577 599 - -
Lal9g0055 599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 400 IPR013083 -
Lal9g0055 599 Pfam Ring finger domain 352 391 IPR001841 -
Lal9g0055 599 ProSiteProfiles Zinc finger RING-type profile. 353 391 IPR001841 -
Lal9g0055 599 Coils Coil 543 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0055 Lal-Chr9 337946 343736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0055 42 592 C3H Transcription Factor Family AT3G16090 61.775 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0055 K10601 - gmx:100816441 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0055 9 337946 343736 Lal9g0055 9 337946 343736 ECH