Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0053 ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCCCAACAACTTATTAACCAAAAGCAACAACAAGAACAACAGCACCAAAACCAACACCACCTTTTTGGTATAACCCCTCCTCTTTCATGGACACCTTTCTCTGATTTTCATGACCCTCCTGATCCTTCTTCCTTCCACTTCCCTCCCACAACCCCTTTCAACTTTGACGACTTCGACGATGACTGGGTCGACTCCCTTATCCCCACCACCGATAATATTCACTCTTCCGATCTTAACCGCCTCTTCTCACCAAATCACTCCTTCAAACCACCGCCATCGCCGGTTACTCCCCACTCTTCACCGCACCCACTTCTCAAATCCCTAATCGATTGCGCTGCTCTCATCCAAACTTCACCGGATCGTGCTTTCCACTCTCTTACCCATTTAACCAAATCAGTCTCTCAACACGGAAACCCTACCCACAGAGTTGCTTTCTACTTTGTTCAAGCTCTCACACGAAAACTTGAACTGGAGAATGACAAAGATCAAAACTTTATAACTGGGGTGCTTCCCACTAATACTATTTCTGAGAAGTTAACATTGTGTTACAAGGCTCTCAATGATGCATGCCCTTATTCCAAGTTCGCTCATTTAACCGCTAACCAAGCTATTCTTGAAGCCACTGAAGGTTCCACGCACGTTCACATAGTTGATTTTGGGATTGTTCAAGGCATTCAATGGGCTGCTTTGTTACAAGCTTTTGCAACTCGTTCTTCTGGGAAACCTGAAAGTGTAACCATTTCTGGGATTCCAGCTATGGCACTTGGAACTTCACCAGCTAATTCTCTTTCTGCTTCTGGTAAACGTTTATCTGAGTTTTCGAAGCTTTTGGGCTTGAATTTTGAGTTTAGACCAATTCTCAGTCCTATTCACGAGCTCAATGAAAAAAGCTTTTGTGTGAAACCAAATGAAGCTTTGGCTGTTAATTTCATGCTTCAGTTGTATAATCTTTTGGATGATGACGAAGGTGATGGTGCTCCAACTGCAGTTCAAACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAAGATTGTTACTCTTGGAGAGTATGAGGCTAGTGTGACAACCCGGGCTGGGTTTTTGAACAGATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTTGAGTCTCTCGATCCTAATTTGCCTGCAGATTTGCCTGAGAGGTTGCAGGTAGAAAGTCTTTTGCTTGGGCGGCGAATCGCCTCTGCGGTTGGAGCAGAGGTTCCAGGGAGTGTAAGGGAAAGAATGGAGGATAAGGAGCAGTGGAGGGTGCTGATGGAAAGTGCTGGTTTTGAATCAGTGGGTCTCAGTCATTATGCAATTAGTCAAGCTAAGATTCTTCTGTGGAATTATAGCTATAGCTCTCTGTATTCACTTGTTGAATCTGAACCTGGGTTTTTATCTCTGGCTTGGAAAGATGTTTCTCTATTAACTGTTTCTTCATGGCGTTAA 1497 0.4395 MAYMCADSGNLMAIAQQLINQKQQQEQQHQNQHHLFGITPPLSWTPFSDFHDPPDPSSFHFPPTTPFNFDDFDDDWVDSLIPTTDNIHSSDLNRLFSPNHSFKPPPSPVTPHSSPHPLLKSLIDCAALIQTSPDRAFHSLTHLTKSVSQHGNPTHRVAFYFVQALTRKLELENDKDQNFITGVLPTNTISEKLTLCYKALNDACPYSKFAHLTANQAILEATEGSTHVHIVDFGIVQGIQWAALLQAFATRSSGKPESVTISGIPAMALGTSPANSLSASGKRLSEFSKLLGLNFEFRPILSPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDEGDGAPTAVQTALNLAKSLKPKIVTLGEYEASVTTRAGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIASAVGAEVPGSVRERMEDKEQWRVLMESAGFESVGLSHYAISQAKILLWNYSYSSLYSLVESEPGFLSLAWKDVSLLTVSSWR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0053 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 119 497 IPR005202 -
Lal9g0053 498 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 119 497 - -
Lal9g0053 498 Coils Coil 12 32 - -
Lal9g0053 498 Pfam GRAS domain family 119 498 IPR005202 -
Lal9g0053 498 ProSiteProfiles GRAS family profile. 109 498 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0053 Lal-Chr9 324150 325646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0053 1 498 GRAS Transcription Factor Family AT5G66770 49.581 4.46e-162 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal9g0053 GRAS 1e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0053 - - adu:107477343 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0074 1 543987 545591 Lal9g0053 9 324150 325646 LSH