Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0027 ATGAAGAGATTGAGATCCAGCGAGGATCTTCACTCCTACGGTGACAAGAAGGATTCTAATTCTAATTCTAATTCAAATCTGAACCGCACGTTTTCTTCTTCTTCTTCTTCAGCCAAGCGAAGCTCCTTCTACTATAAATCTGATAACGGACGCAAGCCTTTAATCTATCCTTCCCCTTCATCCTCACGCTACGACAGAGATCGTACGGTTGACGATGATCGCGATGGTTCTAGGTCGGTTCGGAACCACGATCTGGACAGCTTTCATCGGAGGAGGTACAGGAGTATGAGTCAGAGGTCGGAGAGTCTCTGCGGCGGATCCAGGAGGGATGTCCCAAAAGGGTTTCGGTCAGAGAGGGACCGTTCACGAAGGGAAGGGAGTGTTTCATCATGGAGGAGAGGGTTGAAAGATTTTGATGAGAGAGGAAAGAGCAGAGTAGTTGTTGGAATGGAAGAGAGAGTTTTAACGCGATCACCTAGTAGTAAGGGTTTCAATGTTAAGTCCCCTACTTGGTCTAAGGATTCAGAGAGTGATCATTCTAAGAAAATCTCCTCTTCTTCTCCCACAGGGTTCACAGATGCTAAGTCACCAACTTCTTCCAAGGATTCTGAGACTGACCAATCAAAGAGTGTCGAACTCGTGAAAAACACTGAGGACTTGCAACTTCAGACTTCAAGTTGTAGTAGTGAAATGGAAGAAGGGGAGCTCAAACCCGAACCTGTGCCATCTGTTCAACTTACAAGTGAACAGAATCATTCTATTCCTTCAGAGACAGATGACAAGGAAGTCCCAAATGAATGCCACACTAATGATATTCATACTGCTACCCATGAAACACATCAGATTTCAAGTGAAAATGAGCTCAAACCTATTGACGGTGTTCATTCAGATGCAGAAATGGAAGCTCATAAGGTGTCAGATATCCAAGATTATCCAACCAAAAATTTGATTGTTACTGACACTGAAATTGACACTGTTACTCAGTGTTTGAAGGATAACAAGAAAGATGAATGTTTGAAAGCTGTTACTGAGTGTGAGGAGGAGGAAACAAAGAAGGATGCAGATATGGAGGTGTTGTTGTCTAATGAAGAGGAGCATAAGCACGAGAAAGGCTTGGATCTCAAAAGTAGCTCAGATGTTGACATTCCTCAGTTAAAAGATGAAGTCTCAACAGAAAATGAAGCTGCCAAAGAAGTAAATAGAGAAACAATGATGGAGACAATGGCCAACAACAATGCCAGGGATAAAGGCAAAAGCATCTCTGTTACACCTACCGATGTTGGTCATTCTTCAGAAAGTGCTTTGTGGGTTGATAAAGGGTCGACAGACCTTGCAACATGTGCTGCTGATGTTATGGAAGGGTCAAGCACAAGGGGGTTCGAGTTGTTTTCAAGATCTCCTGTTAGAAAAGTCGAAAAAACAGGACACTCAGATATCAACAACCAGAAGGACAAGAGTCTTGGAATGGAGCAACTTGATCTTTCTCTTAGTTTGCCAAATGTTCTATTACCCGTTGGTGCTCTTGAGACAACAACACAAGTCCCCGGGTCCCCGAGTCAGGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTTCTAACTCAGATGGTTTTACTGCATCCATGTCCTTTTCAGGTTCCCAATCACTCTATCACGAGCCTAGCTGTTCTCTAACGAAAAATACATTGGACTTTGAACAATCCGTTGGTAGTCGCCCCTTATTCCAGGGAATAGATTGGCAAGCCCAGTCTCAAGGTGATCCCAAACAAAAAGAAGTTCAGTTTTCTCAGAGAGCTCCAACGAATGGAAATGGCTCTTTTCACCACTCTCAACCATCATGGGGCATTTTAGATGCTGTTAAAGTCCAACAACCTGGGGTTCTAGAAGGGAGCTCAAAAATGGTTAATGGACTTGAGAAGCACTTGAGTTTTCATAAGCATTTGTCAGGACAGTCAAGACACCATGGCGATGCTAGATCTCCTCCACACAGTGTCGGGTCTCAAGACATTGGATCAAATTATAGTTTTGAGAAAAATTGGGATGTTAGAGACAGGAATAGTGGCGGTTTGAATCGAACTACTAGCTACAAGGAACAGGAACAAGTTCTGGGTGGTGGGGTTGATTTTGTTGAGACAATCATTGCAAAGATTGTTTCTGAATCTGTGCATGTAATGTCCAGAAAGTTCCATGAAATGACCGGACAGTCCATGACATGTCTGAAAGAGGGTATTCGCGAAGTCATGCTCAATGCAGATAGGCATGGGCAGATACTTGCTTTTCAGAAAGTTCTGCAGAACCGGTCTGATATTACGTTGGAAGCCCTACTGAAGTGCCACCGAGTGCAACTAGAAGTTCTGGTTGCTTTAAAAACTGGTTTAACTAATTATCTTCACATAGACAGCAACAACATTTCATCTTCGGAGTTAGCTCAAGTTTTTCTCAACTTAAGATGCAGGAATCTCTCATGTCGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGTGCAGAAGAATGGTTTTTGCAGGGAATGCATGTGTCTTGTGTGTTCTAAGTTTGACGAAGCATCAAATACTTGTAGTTGGGTTGGGTGTGATGTTTGTCTTCACTGGTGCCATACCGATTGTGGATTGCGGGAATCTTATATTAGGAATGGACATAGTACAACTGGAATGAAAGGGATGACTGAGATGCAGTTTCACTGTATTGCTTGTGATCACCCTTCTGAGATGTTTGGATTTGTCAAAGAGGTGTTTCATAATTTTGCAAAAGAATGGTCAGTTGAAACTCTTTGTAAGGAGCTCGAATATGTGAAGAGAATTTTTTCTTCCAGCAAGGATATAAGAGGGAGGCAGCTGCATGAGATTGCAGGTCAAATGCTGCCAAGATTGGAAAATAAATCTAAACTTCCTGAGGTTTTGAGGCATATCATGTCTTTCCTTTCTGACTGTAGGGATTCTTCCAAATTAGCCAAGACAACAAGCTTTTCTGGGAAGGAACCTGTTAAACACAACAATGGAGTAGCTGAGCCCAGCCAGGAAGCTGCTTGGTTGAAATCAATTTATCAAGAAAAGCCACCTCTGTTAGAAAGGTCAGCAAGCATCCTTCCTAGCTTTGACCGAAGTGATAAAAGGTCTCTAGCGCAAGAGTTGCATATCAGTGGTGTCCAAAAAGACTTCGGTTTTGATGAATTGGAGAGCGTAATCAAAATTAAACAGGCAGAGGCTAAAATGTTTCAAGCACGTGCTGATGATGCAAGAAGAGAAGCTGAAGGGTTGAAACGCATTTCCCTTGCAAAGAATGAGAAACTTGAAGAAGAGTATGCTAATAGAATCGCCAAGTTGCGATTGGCTGAGACTAAGGAAATGCGCAAACAGAAATTTGAAGAACTCCAAGCATTAGAGAGGGCACATTTGGAATATTTCAACATGAAAATGAGAATGGATGCAGACATTAAAGATCTATTATCTAAAATGGAAGCTACTAAAAGAAGCCTAGCCATGTGA 3513 0.4239 MKRLRSSEDLHSYGDKKDSNSNSNSNLNRTFSSSSSSAKRSSFYYKSDNGRKPLIYPSPSSSRYDRDRTVDDDRDGSRSVRNHDLDSFHRRRYRSMSQRSESLCGGSRRDVPKGFRSERDRSRREGSVSSWRRGLKDFDERGKSRVVVGMEERVLTRSPSSKGFNVKSPTWSKDSESDHSKKISSSSPTGFTDAKSPTSSKDSETDQSKSVELVKNTEDLQLQTSSCSSEMEEGELKPEPVPSVQLTSEQNHSIPSETDDKEVPNECHTNDIHTATHETHQISSENELKPIDGVHSDAEMEAHKVSDIQDYPTKNLIVTDTEIDTVTQCLKDNKKDECLKAVTECEEEETKKDADMEVLLSNEEEHKHEKGLDLKSSSDVDIPQLKDEVSTENEAAKEVNRETMMETMANNNARDKGKSISVTPTDVGHSSESALWVDKGSTDLATCAADVMEGSSTRGFELFSRSPVRKVEKTGHSDINNQKDKSLGMEQLDLSLSLPNVLLPVGALETTTQVPGSPSQARSVQSLSNTFCSNSDGFTASMSFSGSQSLYHEPSCSLTKNTLDFEQSVGSRPLFQGIDWQAQSQGDPKQKEVQFSQRAPTNGNGSFHHSQPSWGILDAVKVQQPGVLEGSSKMVNGLEKHLSFHKHLSGQSRHHGDARSPPHSVGSQDIGSNYSFEKNWDVRDRNSGGLNRTTSYKEQEQVLGGGVDFVETIIAKIVSESVHVMSRKFHEMTGQSMTCLKEGIREVMLNADRHGQILAFQKVLQNRSDITLEALLKCHRVQLEVLVALKTGLTNYLHIDSNNISSSELAQVFLNLRCRNLSCRSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDEASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGMKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVETLCKELEYVKRIFSSSKDIRGRQLHEIAGQMLPRLENKSKLPEVLRHIMSFLSDCRDSSKLAKTTSFSGKEPVKHNNGVAEPSQEAAWLKSIYQEKPPLLERSASILPSFDRSDKRSLAQELHISGVQKDFGFDELESVIKIKQAEAKMFQARADDARREAEGLKRISLAKNEKLEEEYANRIAKLRLAETKEMRKQKFEELQALERAHLEYFNMKMRMDADIKDLLSKMEATKRSLAM 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0027 1170 MobiDBLite consensus disorder prediction 1 286 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 582 612 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 64 97 - -
Lal9g0027 1170 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1170 IPR004082 -
Lal9g0027 1170 Pfam Coiled-coil region of Oberon 1035 1158 IPR032535 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 728 750 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 767 782 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 782 797 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 809 830 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 855 875 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 928 947 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1065 1085 IPR004082 -
Lal9g0027 1170 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1104 1126 IPR004082 -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 1 16 - -
Lal9g0027 1170 Pfam PHD - plant homeodomain finger protein 818 941 IPR032881 -
Lal9g0027 1170 PANTHER PROTEIN OBERON 4 1 1170 - -
Lal9g0027 1170 Coils Coil 382 402 - -
Lal9g0027 1170 CDD PHD_OBE1_like 848 907 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 182 198 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 17 44 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 646 693 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 199 213 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 646 660 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 582 611 - -
Lal9g0027 1170 Coils Coil 1071 1139 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 111 150 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 254 286 - -
Lal9g0027 1170 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0027 Lal-Chr9 144704 151124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0027 800 967 PHD Gene Family AT5G57380 26.190 2.04e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0027 - - gmx:100817003 1437.94