Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0010 ATGGCCAACTCTCTCCTTCTGCCAATGTTATTGTTACTCATTCTCTACTCTATTTTCCAACCTGTTGTTTCTCTAAATCCAACTTTGGAAACCAAAACTCTTATTCACTTCAAGAACCATTTGAAGGACTCCTTGAATTCCTTGGCTTCATGGAATGAATCAAACTCTTCATGTGAGTTTTATGGAATCACATGTGATCCATTTACTCTTAAAGTCACAGAAATCTCACTGGAGAATAAGTCTCTCTCAGGTGAAATTTTCCCTTCAATCTCAGTCCTGAAGAGCCTGCAAGTTCTGTCACTACCATCAAACTCAATTTATGGAAGGCTTCCTTCAGACATAAGTAACTGCACCAACCTCAGAGTTTTGAACCTCACAGGGAATCAAATGTTTGGAAGAATACCAGACTTGTCTGGTCTCAGAAGCCTTCATGTTTTGGACCTTTCAGCAAACTACTTTTGTGGCAGCATTCCAAGCTGGGTTGGGAATCTAACTGAATTGATTTCACTAGGTCTTGGAGAAAATGAATACACCGAGGGTGAGGTTCCTGTGACTCTTGGAAATTTGAAGAACTTAACTTGGCTCTATCTTGGTGGTTCTAATTTGATAGGTGAGATTCCTGAATCAATATATGAAATGAAGACCTTGGAGACACTTGATATTTCAAGAAACAAGATATCTGGCAAACTCTCAAGGTCAATTTTCAAGTTGGAAAAGCTCTACAAGATTGAGCTTTTTGCAAATAACTTGACTGGTGAAATCCCTGTTGAGCTAGCTAACCTAACCAATTTGCATGAGATTGATATCTCTGCAAACAATATGCATGGCGCGTTGCCAGAACAAATTGGTAATATGAAGAATTTGGTTGTTTTTCAGCTCTATAAAAACAGCTTTCATGGTAAACTTCCTGCTGGATTTGGAGATATGCAACATCTTGTTGGGTTCTCAATTTATGAAAACAACTTCAGTGGGATGATTCCAGAAAATTTTGGCCGGTTTTCGCCACTTGAGAGTATTGACATATCAGAGAACCAATTCTCAGGTGATTTCCCAATGTTCTTGTGTGAAAACAAGAAGTTGAGGTTTTTGCTTGCATTGCAAAACAATTTCTCTGGCAATTTTCCTAAGTCTTATGTTAGATGCAAATCTTTAGAGAGGTTTAGGATCAGCAGGAACCGGTTATCCGGGAGGATTCCAAATGAAGTTTGGGCACTTCCACTTGTGAAAATAATTGACTTGGCTTATAATGATTTCAGCGGTGAGGTATCTTCAGACATTGGTTTTTCTACTAACTTAAATGAGTTGATTTTGGTAAAGAACATGTTTTCAGGAAAACTACCATCAGATATTGGCAAGTTGGTAAATTTGGAGAAGCTTTACTTGAGCAACAATAATTTCTGTGGTGAAATACCATCTGAAATTAAATCTTTGAAGCAATTATCATCTTTGCATGTTGAACAAAATTCATTAAGTGGGTCAATACCTACAGAACTAGGCCATTGTGAAAGGCTTGTGGACTTGAATCTTGCTTGGAATTCTCTATCTGGAAATATTCCACAGTCAGTCTCACTCATGAGCTCATTGAACTCTCTTAATCTATCTGGAAACAAACTTACAGGTTCTATTCCAGACTATTTAGTCACTATGAAACTAAGCTCTGTGGATTTTTCAGAGAACCTTTTTTCTGGGAGAATTCCATCTGATATTTTTATTATTAGTGGAGAGAAAGCTTTTGTTGGAAACAAGGGATTGTGTGTTGAGGAAAACTTACAACCTTCCAGGAATTCTGATTTGAAGATTTGTGTCAAAAGTCATGGTCAGAAAAGGGGGTTTGCTGATAAAATTGTTTTGCTCTCTTTCATTGCTTCTATGTTTGCCCTCATTTTAGCTGTGTTTCTGCTTTTAAGTTGCAGACATAATATAAAGCAGCATGGTGTGGAAAATAATTTACAAGGTCAAAATGAAGCAAATCAAAAATGGAAACTAGCATCTTTCGACCGAATAGATATTGATGCAGATGAAATATGTAATTTGGATGAAGATAATGTAATAGGCAGTGGTGGTACCGGAAAGGTTTACCGAGTGGAGTTGAAGAAAAATCGTGGCATCGTGGCTGTAAAACAACTAGGGAAAGGAAATGGAGTAAATAGTTTAGCTGCAGAGATGGAGATTTTGGAGAATATTAGGCATAGAAATATTCTTAAACTTTATGCTTGTTTACTTAGAGGAGCATCCAAATTTTTAGTGTTGGAGTACATGCCCAATGGTAATCTTTTTGAAGCTCTTCACAGACAGACAATAAAAGATGGGAAGACAGAATTGGATTGGAACAAAAGGTATAAAATTGCTCTAGGAGCTGCAAAAGGAATTTCTTATTTACACCATGATTGTTCACCACCTATCATTCACACAGACATAAAATCCAGCAACATTTTGCTTGATGAGGATTATGAGCCAAAAATTGCTGATTTTGGTGTTGCAAGATTTGTAGAAAAATCTAATAACAATATGGATTTTACCTGTCTAGCTGGTACACATGGATATATTGCTCCAGAACTGGCTTATACAACAAACATTACAGAAAAGAGTGATGTTTATAGCTTCGGAGTGGTCTTACTAGAATTAGTGTCTGGGAGAGAAGCAGTTGGAGAGGATTATGGAGAAGCCAAGGATATTGTTTATTGGGTATTGACTAATCTGAATGAGGGTGAAAGTAGTGTTGTAAGCATTGTTGATGATAGAATGGTATATGAGTGTGTTAAAGATGTGATTAAAGTCTTGAAGATAGCAATCAAGTGCACTACTAAGCTTCCATCTTTGCGCCCTACAATGAGAGGGGTTATCAAATTTCTAATTGATGCTCAACCTTGCTCATTCAAATTCACATGCAACAATCTTGGCAAAAATGGAGGACACACTTTGCTCTAG 2928 0.3716 MANSLLLPMLLLLILYSIFQPVVSLNPTLETKTLIHFKNHLKDSLNSLASWNESNSSCEFYGITCDPFTLKVTEISLENKSLSGEIFPSISVLKSLQVLSLPSNSIYGRLPSDISNCTNLRVLNLTGNQMFGRIPDLSGLRSLHVLDLSANYFCGSIPSWVGNLTELISLGLGENEYTEGEVPVTLGNLKNLTWLYLGGSNLIGEIPESIYEMKTLETLDISRNKISGKLSRSIFKLEKLYKIELFANNLTGEIPVELANLTNLHEIDISANNMHGALPEQIGNMKNLVVFQLYKNSFHGKLPAGFGDMQHLVGFSIYENNFSGMIPENFGRFSPLESIDISENQFSGDFPMFLCENKKLRFLLALQNNFSGNFPKSYVRCKSLERFRISRNRLSGRIPNEVWALPLVKIIDLAYNDFSGEVSSDIGFSTNLNELILVKNMFSGKLPSDIGKLVNLEKLYLSNNNFCGEIPSEIKSLKQLSSLHVEQNSLSGSIPTELGHCERLVDLNLAWNSLSGNIPQSVSLMSSLNSLNLSGNKLTGSIPDYLVTMKLSSVDFSENLFSGRIPSDIFIISGEKAFVGNKGLCVEENLQPSRNSDLKICVKSHGQKRGFADKIVLLSFIASMFALILAVFLLLSCRHNIKQHGVENNLQGQNEANQKWKLASFDRIDIDADEICNLDEDNVIGSGGTGKVYRVELKKNRGIVAVKQLGKGNGVNSLAAEMEILENIRHRNILKLYACLLRGASKFLVLEYMPNGNLFEALHRQTIKDGKTELDWNKRYKIALGAAKGISYLHHDCSPPIIHTDIKSSNILLDEDYEPKIADFGVARFVEKSNNNMDFTCLAGTHGYIAPELAYTTNITEKSDVYSFGVVLLELVSGREAVGEDYGEAKDIVYWVLTNLNEGESSVVSIVDDRMVYECVKDVIKVLKIAIKCTTKLPSLRPTMRGVIKFLIDAQPCSFKFTCNNLGKNGGHTLL 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0010 975 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Lal9g0010 975 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Lal9g0010 975 CDD STKc_IRAK 684 951 - -
Lal9g0010 975 Pfam Protein kinase domain 680 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0010 975 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Lal9g0010 975 Gene3D Ribonuclease Inhibitor 239 310 IPR032675 -
Lal9g0010 975 Gene3D Ribonuclease Inhibitor 179 238 IPR032675 -
Lal9g0010 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Lal9g0010 975 Gene3D Transferase(Phosphotransferase) domain 1 753 960 - -
Lal9g0010 975 SUPERFAMILY RNI-like 310 570 - -
Lal9g0010 975 SUPERFAMILY Protein kinase-like (PK-like) 676 951 IPR011009 -
Lal9g0010 975 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 964 - -
Lal9g0010 975 SUPERFAMILY L domain-like 54 393 - -
Lal9g0010 975 Pfam Leucine Rich Repeat 216 236 IPR001611 GO:0005515
Lal9g0010 975 Pfam Leucine Rich Repeat 455 477 IPR001611 GO:0005515
Lal9g0010 975 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Lal9g0010 975 SMART LRR_typ_2 453 476 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 525 549 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 477 501 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 189 213 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 93 117 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 140 164 IPR003591 -
Lal9g0010 975 SMART LRR_typ_2 261 285 IPR003591 -
Lal9g0010 975 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 9 964 - -
Lal9g0010 975 Gene3D Ribonuclease Inhibitor 311 596 IPR032675 -
Lal9g0010 975 Gene3D Phosphorylase Kinase; domain 1 642 752 - -
Lal9g0010 975 SMART serkin_6 678 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal9g0010 975 ProSiteProfiles Leucine-rich repeat profile. 527 549 IPR001611 GO:0005515
Lal9g0010 975 ProSiteProfiles Protein kinase domain profile. 678 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0010 Lal-Chr9 59198 65675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0010 15 957 Receptor kinase-like Gene Family AT1G72180 54.469 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal9g0010 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0010 - - gmx:100789704 1449.49