Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1576 ATGCAATTCACAGTGGGGGTTGTGATTTGTGAGCCACTATTATCTGGTAGAATGCACGCTGCACACCTTGATCTGGCTTCATCCACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAGGTGCTCAAGAGTGAAGAATACATAGCTGGAGATGTAGGAACCTCTCTTCAGAAAGCTTTTTTCAGAATGGACATAATGATGCGAGGTGAAAGGGGGAGGAGGGAATTAGCAATCTTGGGTGATAAGATAAACAAGTTTAATGGGATTTGGTCTCCCAGAGGCAGTGATGGTAATGACCAAGGTGATGATGATTGGGATTTTGAGGAGGGACCTCATTCTGATTATGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCACTTATCAGAAACAATCAACTTATTGTTGCAAATGCTGGTGATTCACGTTGTGTTATATCTAGGAATGGTCAGGCATACAATATGTCTAGAGACCACAAACCTAATCTTGAGATTGAGAAGGAAAGAATCATAAAAGCTGGTGGTTTTATTTATGCAGGACGAATTAATGGGATTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAGAACAAATTTCTTTCTTCTGAAAAACAAATTGTGACAGCCAATCCAGATATAAACACGGTTGACCTTTGTGATGAACATGAATTTATGGTGCTAGCATGTGACGGCATATGGGATTGCTTGTCAAGCCAACAGGTGGTAGATTTTGTACGTCAAGAACTGCTCTCAGTAAGAAAACTTTCAGAAGTGTGTGAAAGAGTACTAGATCGATGTTTGGCACCATCAATCACAGTTGGTGAGGGATGTGATAACATGACCATGCTCTTGGTTCAGTTCAAAAAACAACTTAGCAGTCACAGCAATCTTCTTGAAGTGAACCAAAACTGA 963 0.4071 MQFTVGVVICEPLLSGRMHAAHLDLASSTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEEYIAGDVGTSLQKAFFRMDIMMRGERGRRELAILGDKINKFNGIWSPRGSDGNDQGDDDWDFEEGPHSDYAGPTSGSTACVALIRNNQLIVANAGDSRCVISRNGQAYNMSRDHKPNLEIEKERIIKAGGFIYAGRINGILNLARAIGDMEFKQNKFLSSEKQIVTANPDINTVDLCDEHEFMVLACDGIWDCLSSQQVVDFVRQELLSVRKLSEVCERVLDRCLAPSITVGEGCDNMTMLLVQFKKQLSSHSNLLEVNQN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1576 320 ProSiteProfiles PPM-type phosphatase domain profile. 8 304 IPR001932 -
Lal8g1576 320 PANTHER PROTEIN PHOSPHATASE 2C 18 312 IPR015655 GO:0004722|GO:0006470
Lal8g1576 320 Pfam Protein phosphatase 2C 24 83 IPR001932 -
Lal8g1576 320 Pfam Protein phosphatase 2C 131 286 IPR001932 -
Lal8g1576 320 CDD PP2Cc 28 304 IPR001932 -
Lal8g1576 320 MobiDBLite consensus disorder prediction 104 127 - -
Lal8g1576 320 SUPERFAMILY PP2C-like 24 305 IPR036457 -
Lal8g1576 320 SMART PP2C_4 1 302 IPR001932 -
Lal8g1576 320 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 18 312 - -
Lal8g1576 320 ProSitePatterns PPM-type phosphatase domain signature. 31 39 IPR000222 GO:0043169
Lal8g1576 320 Gene3D - 17 305 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1576 Lal-Chr8 20076629 20080233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1576 19 312 PP2C-type Phosphatase Gene Family AT2G25070 71.237 6.54e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1576 K17499 - gmx:100793667 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1576 8 20076629 20080233 Lal21g0302 21 2001811 2008770 PCT
Lal21g0302 21 2001811 2008770 Lal8g1576 8 20076629 20080233 PCT