Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1574 ATGGCATTGTTCAGGAAGTTCTTCTATAAGAAGCCCCCAGATGGCCTTCTTGAAATCAGTGAAAGGGTTTTTGTGTTTGATTATTGCTTTACTGCGGAGACAATGGAAGAAGATGAATATAAAGTTTATATAGAGGGAATAATTGCGCAACTTCATGGTCATTTCCCTGATGCTTCATATATGGTGTTCAACATGCACGAAGGAGAAAGCCCAAGTCAGATTTCTAACATTTTGTCAGACTATGATATGATGGTGATGGACTATCCTCGACAGTATGAGGGTTGCTCATTACTGACGATGGAGATGATCCACCATTTCTTGAAATCGGGCGAAAACTGGATTCAACTTGGGCAGCAAAATCTTATCTTGATGCACTGTGAACGAGGGGGGTGGGCGGTTCTAGCATTTATGCTGGCTGCATTCTTGATTTATAGAAAGCAGTTTACAGGGGAGCAGAAAACGCTAGATATGATATACAAGCAAGCTCCTCGGGAGCTTTTGCAATTGATGTCACCATTGAATCCATTACCTTCACAATTGAGGTATCTTCAGTATATATCAAGAAGAAACGTTGGTTCGGAATGGCCTCCTCTAGATAGGGCACTTACATTGGACTGTGTAATTCTAAGACTCATTCCTAAAATGGACACAGAGGGTGGTTGTCGTCCTATATTTAGGATATACGGACAAGATCCTTTTATGGCAGCTGATCGGACTCCCAAAGTTCTATTTTCAACTCCAAAGAGAAGCAAACTTGTTCGCTATTACAAGCAGGCTGATTGTGAACTGGTTAAGATTGACATCAATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTCTCCATAGTGATTTGGAACGTGAAAATATGATGTTTCGGGTGATGTTTAACACAGCATTCATAAGATCAAATATCTTGATGCTTAACCGTGATGAGATTGACATATTATGGAATGCTAAAGACTACTTCCCTAAAAATTTCAGAGTCGAGGTTCTTTTCTCTGATATGGATGCTTCTTCTTCTGTTATTCCAATTGATCTGCCTTGTATTGAGGAGAAAGAAGGCCTACCGGTTGAAGCATTTGCTAAGGTAAAAGAAATGTTCAACAATGTTGACTGGCTAGATTCAAATACAGAAGTTGCAAATGTGCTCCAACAGATCACAGCATCAAATATCCTTCTTGAAAGGTTGGACAGCAGCGTTTCTTCTCCGACAAACAAATTGCTTAATGAGTCATTGTCCGGAAGATTGAAATTTGATCCTAAGACACAAAGCAATATGAACAGTTCACCTGTTGCAGCTCCCAGGAGATCTATATTCGAATATGCTCATATCGAACAGAAGATAGAGCCATTCGAATCAAAGGCATTGCCTGAAAATAACATCCAGACTCTTGCACCGAAGGAGATTGAATCTCCAGCATCAAAGAAATCATTGGAAAATGATACCAACTTTCGTACATCTATGGTTCAAGGGAAACAATCTATTCCCTTAATTGAACCATCCATGGATACAAGCTCAATGGCAAAAAAGATTGAACCATTAGAATCCAAGGATATGGATATTGAGTCATTAGAATCATTGGATTATGGCACCAAGTTTCTTACATCTGTGGCTCAGGGGAAACAATATATTCCCTCAATTGAACCATCCACTGATGCAAATTCAATGAAAAAGAAGATTGAACTTCTAGAATCAAAGGAAATAACATCAGAATCAAAGGTATTGCCAGAAAATAACATGAAGATTTTTGCACCTGTGGATCAGGAGAAACAAACTATTCCCTTAACTGGAATATCAACAGATTCAAATTCTACTGAAATGCAGATTGAATCATTAGAATCAAAGGAATTGTTAGAAGATGTTACCAGGTTTCCTGTAGTTGTGGCTCAAGGGAAAAAATCTACTCCGCAAGTTGAACCATCACTGGGTGCAAATTCCATGGAAGATAAGATTGGACTATTAGAGCCAACGAAAAAGGAGGTTGAATCATTAGGCTCGACCTTCTTGTTGGAAAGCGACAGAAGATTAAAAGTTGAACCAAAGGTGCTGCCAAAAATTGAGATTAAGAGTCCGATTTCTGAAGTTCAGGAGAGACTTTCAATGTCCTCACTTGAATCATTTGAGGGTACTCCTGTGAAAAAGAAGATAGAAACATTAGAATCAAAGGAATCACCAGAAAATAACAAGACTCTTGCACCTGTCAATCAGGTGAAACAACCTATTCCCTCTTCTGGACTCTCAATGCATTCAAATTCTAATGATATGCAGATTGAACCTTTCGAATCAAATGCATTGTTGGAAAATATTACAAACTTTCCCGTATCTGTGGCTCAAGGGAAAAAGTCTACTACTCCCTTAGGTGAACTGTCAGCGGATGCAAATTCAGTTAAAAAGAAAATTGGGCCATTAGAGTCAAAGGAAAAGGAAACTGAATCATTAGAGTCAAAGTCATTGTTGGAAAATGATGACAAGTATTCTACATCTATCACTCAAGGGAAACATTCTATTCCTTTGGTTGAACCATCGATGGATGCAAATTCAACCAAAAAGGAGAGTGAGCAATTACAAGCAGAAGTGTTGTCAGAAAATGATATCAAGAGGAAACAAGATAGTCACTCATTTGACCCTATTCTCGTTGATGCAGCAAACTTGACTAAAAAGAAGATTGAACCTCAAAAGTTGAAGGTTGCTCTTGATTTACCCACACAATCAAAAATCATATCTCCATGGGTTCGTCAAGCTACTCGATCTGCTCCAGTTTCTTATAGTAACTTTTTGAAAGCTTCTCCTGTATCTATTTCAAGATATAATAGTGCACCATCAGCTCTTGGACTAACAACTGTGTTGCAGGATCACGCACCAATGGATGATATCAAAGAAGTCACTCAAGAAGTGACAGTTTCAGATTCAAAGGTGCAGAAATCTGTAGAACCTGGTTTTACAAGTGTTCCTCCAGCATCATCATCACCAGCATTGATTCCATCTAAAGTGGATGCTCTTTCCACAACAGAGAAGACTTCTCGACCCCTTGTTCCTGCTTCCCCTCCTCCTCCTCCACCACCTCATCATCATCCTCAACATGAGCCTAGTTCAAAATTGATGCAATCCATTTGTGAAAATGCAATGCATGAAAAAGGTAGAAAATCATTAGAGACTCCTCTGCCTCCTCCACCACCCCCACTGCTTCCTGGAGCATCCCTTTCCACAGTCGAAGGTTCACTTAAAGGTCCACCTCCGCCTCCGCCTCCACCTCTATATTCAACTGGAAAGGCTGCATCTTCAATACCTTTGCCTCCTCCACCTCCATTGAGTATGAATAAATCGGCTGCTTCATCTGGCCCTCCTCCACCACCTCCACCTCCTCGTCATTCTTCCAATACACCTGCTCCAACTCTTACATCATCAGCCCCGCCACCACCCCCTCCTCCTTCATCAAAGAATTCTGCTGTTCCATCTCCGCCTATACCCCCTACTGCATCGTTGCAGCCTCATGCACCTCCAGTTCCTGGACCGCCCGGTGTTCCGTTTGGTGCAAAGGGTCGCGGGCTATTTCGAGCTAACCCAAAAGGTCCATCTCAGACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGAGCCGTGCATGGAAGCTTATGGGCAGAGACACAGAAACTTGATGAAGCTTGTAGGGCTCCGGAGTTTGACATGTCAGAACTTGAGAGTCTTTTCTCAGCAGCTGCTCCAAATTCTGATCATGGAAAAGAAGGAAATTCAAATCGCCGTACCTCGCGCCAAAAAGTTGAAAAAGTGCAACTGATTGAACTCAGGAGGGCATATAACTGCGAGATCATGCTTACAAAAGTCAAAATCCCCCTGCCCGATTTAATGAGTGCGGTGCTTGCATTGGATGATTCGGTATTAGATGTTGATCAGGTTGAGAACCTCATAAAGTTCTCTCCAACCAAAGAAGAGATGGAAATGCTTAAGGCCTATACTGGAGATAAGGACAACCTGGGAAAGTGTGAACAATTCTTCTTAGAAATGATGAAGGTGCCAAGAGTGGAAAACAAGTTAAGGGTTTTCTCTTTTAAGATGCAATTCTGCACCCAGGTGAAAGATCTTAGAAGGGACTTGAGTATTGTAAACTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCTGCTATTGGGTTCCGACTGGATAGTCTCCTTAAACTCACTGATACGCGAGCCAGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTTTAGATTTCCCGAAAGACCTGGTGCATTTGGAGGGTTCAACCAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATAAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGGGCCGTGTCAGAAAGCTTCTGCCAGATTTTAAAGGAATTTCTTAGTAATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCCCTTTACTTTGGAGAAGATCCGGCACGTGTCCCATTTGAACAAGTTGTATCTACTCTGCTAAACTTTGTGAAGATGTTCATCCGAGCGCATGATGAAAATTGCAAACAGCTTGAAAATGAGAAAAAGAAAGCAGAAAAGGAAGCTGAAAAGCTATCTGGTAAAAAGGACTCGGAACATACGATACGATCCAACATCAAAAATGCTAATAATAGTAAATGA 4839 0.4094 MALFRKFFYKKPPDGLLEISERVFVFDYCFTAETMEEDEYKVYIEGIIAQLHGHFPDASYMVFNMHEGESPSQISNILSDYDMMVMDYPRQYEGCSLLTMEMIHHFLKSGENWIQLGQQNLILMHCERGGWAVLAFMLAAFLIYRKQFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVILRLIPKMDTEGGCRPIFRIYGQDPFMAADRTPKVLFSTPKRSKLVRYYKQADCELVKIDINCHVQGDVVLECISLHSDLERENMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVIPIDLPCIEEKEGLPVEAFAKVKEMFNNVDWLDSNTEVANVLQQITASNILLERLDSSVSSPTNKLLNESLSGRLKFDPKTQSNMNSSPVAAPRRSIFEYAHIEQKIEPFESKALPENNIQTLAPKEIESPASKKSLENDTNFRTSMVQGKQSIPLIEPSMDTSSMAKKIEPLESKDMDIESLESLDYGTKFLTSVAQGKQYIPSIEPSTDANSMKKKIELLESKEITSESKVLPENNMKIFAPVDQEKQTIPLTGISTDSNSTEMQIESLESKELLEDVTRFPVVVAQGKKSTPQVEPSLGANSMEDKIGLLEPTKKEVESLGSTFLLESDRRLKVEPKVLPKIEIKSPISEVQERLSMSSLESFEGTPVKKKIETLESKESPENNKTLAPVNQVKQPIPSSGLSMHSNSNDMQIEPFESNALLENITNFPVSVAQGKKSTTPLGELSADANSVKKKIGPLESKEKETESLESKSLLENDDKYSTSITQGKHSIPLVEPSMDANSTKKESEQLQAEVLSENDIKRKQDSHSFDPILVDAANLTKKKIEPQKLKVALDLPTQSKIISPWVRQATRSAPVSYSNFLKASPVSISRYNSAPSALGLTTVLQDHAPMDDIKEVTQEVTVSDSKVQKSVEPGFTSVPPASSSPALIPSKVDALSTTEKTSRPLVPASPPPPPPPHHHPQHEPSSKLMQSICENAMHEKGRKSLETPLPPPPPPLLPGASLSTVEGSLKGPPPPPPPPLYSTGKAASSIPLPPPPPLSMNKSAASSGPPPPPPPPRHSSNTPAPTLTSSAPPPPPPPSSKNSAVPSPPIPPTASLQPHAPPVPGPPGVPFGAKGRGLFRANPKGPSQTKRSNLKPYHWLKLTRAVHGSLWAETQKLDEACRAPEFDMSELESLFSAAAPNSDHGKEGNSNRRTSRQKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLALDDSVLDVDQVENLIKFSPTKEEMEMLKAYTGDKDNLGKCEQFFLEMMKVPRVENKLRVFSFKMQFCTQVKDLRRDLSIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVHLEGSTKIQLKYLAEEMQAISKGLEKVVQELTASENDGAVSESFCQILKEFLSNAEAEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVSTLLNFVKMFIRAHDENCKQLENEKKKAEKEAEKLSGKKDSEHTIRSNIKNANNSK 1612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1574 1612 MobiDBLite consensus disorder prediction 1245 1265 - -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 1097 1177 - -
Lal8g1574 1612 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 802 824 - -
Lal8g1574 1612 Gene3D Protein tyrosine phosphatase superfamily 13 191 IPR029021 -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 801 870 - -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 971 1202 - -
Lal8g1574 1612 Pfam Formin Homology 2 Domain 1195 1566 IPR015425 -
Lal8g1574 1612 PANTHER FORMIN-J 1 1107 - -
Lal8g1574 1612 PANTHER FORMIN-J 1101 1603 - -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 971 1012 - -
Lal8g1574 1612 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1192 1592 IPR015425 -
Lal8g1574 1612 Gene3D - 196 341 - -
Lal8g1574 1612 Coils Coil 1567 1594 - -
Lal8g1574 1612 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lal8g1574 1612 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Lal8g1574 1612 SMART PTEN_C2_2 197 337 IPR014020 -
Lal8g1574 1612 SMART it6_source 1191 1612 IPR015425 -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 1013 1027 - -
Lal8g1574 1612 Gene3D Formin, FH2 domain 1211 1604 IPR042201 -
Lal8g1574 1612 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1205 1586 - -
Lal8g1574 1612 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 1578 1612 - -
Lal8g1574 1612 MobiDBLite consensus disorder prediction 1578 1602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1574 Lal-Chr8 20051974 20062995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1574 1 437 FH2 protein (formin) Gene Family AT2G25050 66.970 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1574 - - aprc:113848213 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1574 8 20051974 20062995 Lal8g1574 8 20051974 20062995 ECH
Lal7g1263 7 18118597 18119901 Lal8g1574 8 20051974 20062995 ECH
Lal19g1382 19 16631403 16632663 Lal8g1574 8 20051974 20062995 ECH
Lal8g1574 8 20051974 20062995 Lal25g1030 25 13590424 13602610 LSH