Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1572 ATGGCTGCACCACATGATGAAAATGTTCCTGCTAGCAGCATAGTTTCCATTTCAAGGATTGTGTCTGTGCATCAAAAGCTATTGCAACCTGATCAGAGGGTTTTGAACCTTTCAAATTTAGATAGGCAGTGTCCCACACATATGTACCTTGTGTTCTTTTATAAGCATCATACTTTGAAGGATCATTTGTCCCTCAATTCAGTGTTCAAAGGATTGAAATCTGGCTTGGAGGAGACCTTGAGTATATGGTACCCAGGTGCAGGTAGATTGAGGCAGAACCAAATTGATGAGAAGCTCAACCTGTGTTGCAACAATGAAGGTGCAATTCTGGTGGAGGCTGAAACCACTGTAAAAATCTCACAACTTGGAGATCTCTCCCAGTACAGTGATTTTTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGGTGATGGGGATTTCTCAAACATGCCTTTGGTAGTTGCTCAGGTTACAAAGTTTGGATGTGGAGGATATTCAATTGGTATTGGAACAAGCCACTCTTTATTTGATGGACCAGCAACCTACAATTTCTTGAATGCATGGGCCTCAAATTCTGAAATTGTGAAGGAAAAGTGTGAGAATGAGGTACCAAAACCAGTGCATGAGAGAGGGATACTACTACTAAAAAGTGATAATCCTCAAACATCAAAAGGATCTATAAATTTGGCATCAAAATCAACTTTAAATGTTCAACAACAAGCAAGGACTATTGCAATAGTTCATCTACATCAACTTATAATGCAAGCAGCTAGTGGATCAAAGGGGTTTCCAATACAAATTATTGGACCCTCTGATCAAAACAAGTATGTTCTTAAAACCTATCATATATCTGGTGCAATGATAGATTACTTGAAAAAGAAACATTTCCCCATGTGCAAATCAGGTTCTCTTCCCTTCTCAACCTTTGAGGTTCTTGCTGCACATCTTTGGAAGGTAATTTTGAAAATAAGAGAAGCCAAGAATGGTGTAAATAATGACTATGTTAGAACATATATTGAAGCACTTGAAGGAGGTGCAAATGGTTCTTCTCTTCCTCCATTGAAAGAGCTCACTTTGGTTTCTGATTGGACAAGAATACCATTCCATAACATTGAGTTCTTTAATGGAAAAGCAGCTTATGCATGTCCCCTTGCCACTCCAGTTCCACAGGTTGCATACTTCATGCAAACTCCAACTCATTATGGTGATGATGTTCATGTCAGAATTGCCATTCAACCACAATCCTTGGATGCTTTTACTCACTGCTTCTTCAACAATGCTAACGTTTTATCATCAATCTAA 1299 0.388 MAAPHDENVPASSIVSISRIVSVHQKLLQPDQRVLNLSNLDRQCPTHMYLVFFYKHHTLKDHLSLNSVFKGLKSGLEETLSIWYPGAGRLRQNQIDEKLNLCCNNEGAILVEAETTVKISQLGDLSQYSDFFEKLVYKPAFGDGDFSNMPLVVAQVTKFGCGGYSIGIGTSHSLFDGPATYNFLNAWASNSEIVKEKCENEVPKPVHERGILLLKSDNPQTSKGSINLASKSTLNVQQQARTIAIVHLHQLIMQAASGSKGFPIQIIGPSDQNKYVLKTYHISGAMIDYLKKKHFPMCKSGSLPFSTFEVLAAHLWKVILKIREAKNGVNNDYVRTYIEALEGGANGSSLPPLKELTLVSDWTRIPFHNIEFFNGKAAYACPLATPVPQVAYFMQTPTHYGDDVHVRIAIQPQSLDAFTHCFFNNANVLSSI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1572 432 Gene3D - 268 321 IPR023213 -
Lal8g1572 432 Gene3D - 322 424 IPR023213 -
Lal8g1572 432 Gene3D - 15 225 IPR023213 -
Lal8g1572 432 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 318 425 - -
Lal8g1572 432 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 13 318 - -
Lal8g1572 432 Pfam Transferase family 32 325 - -
Lal8g1572 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 318 425 - -
Lal8g1572 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1572 Lal-Chr8 20035452 20038310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1572 38 423 Monolignol Biosynthesis Gene Families AT5G48930 23.059 1.85e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1572 K15400 - gmx:100779295 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1572 8 20035452 20038310 Lal8g1572 8 20035452 20038310 ECH