Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1570 ATGATGCTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTTCCTTATTCTTCATCAACCCACTTCTGTTCTTTCTTCATCTCAACTCTCACCCTTTACTCAAATTTCCACATCAATGTATGTTTCCTCCCCAGGCCATGAAGAGAAAACGCATTCACACAAGAATTTGGTAATAGCTCTTGTAGTTGTCACCACTTCACTTGCTGCACTTATTTTGTTTTGTCTATTCTTCCGGATTTATTATACCAAGTATTATTCATCAAAATCAACTAAGAAAAACGTTCAAACATCAGGCCAAGATGCTGAAAGGGGGGTAGCTTTAGCTCCATTTTTGAGCAAGTTTAGTTCTATAAAGGTGGTTGATAAGAAGGGGTGTGTTCCAATAATTGATTATAAGCAGATAGAAAAGGGCACCAACAATTTCAAGGAAAGTAACATCTTAGGTGAGGGTGGTTTTGGTTGTGTTTACAAGGCTCGGTTGGATGACAACTTAGTCGTTGCTGTCAAGAAACTTCATTGTGAAAAAAGTCAGTATGCTGAGAAAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATATAATTTCTTTACTGGGTTGTAGCAGTCATGAGGATACCAAGTTTCTTGTTTATGAACTGATGCAGAATGGATCATTGGAAACTCAATTACATGGACCCTCTCGTGGCTCTGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTGAAATATCTGCATGAGCATTGTTGCCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATGCAAGCTTCAGTGCCAAGGTCTCTGATTTTGGTCTTGCCATAATTGATGGGTCCCAAAACAAGATTAACATCAACCTTTCAGGCACCTTGGGCTATGTAGCTCCTGAGTATATTTTAGATGGTAAATTGACTGATAAAAGCGATGTCTATGCTTTCGGGGTTGTGCTTCTTGAGCTTCTATTAGGAAGGAAGCCTGTGGAGAAACTGGCACCACTTCAATGTCAATCTATTGTTACATGGGCTATGCCACAACTCACAGACAGATCCAAGCTTCCAAATATTGTGGATCCTGTGATTAAAGATACAATGGATCTCAAGCACTTATACCAGGTTGCTGCTGTGGCTGTGCTATGTGTGCAACCGGAGCCAAGCTACCGGCCACTGATTACAGATGTTCTCCACTCACTCATCCCTCTTGTGCCTGTTGAACTAGGAGGAACACTGAGAGTTTCACAAATGACACAACAACTCTTCTTCCCTATTGATCCTTGTACCCAATGA 1326 0.4027 MMLLLLLLLLLLFLILHQPTSVLSSSQLSPFTQISTSMYVSSPGHEEKTHSHKNLVIALVVVTTSLAALILFCLFFRIYYTKYYSSKSTKKNVQTSGQDAERGVALAPFLSKFSSIKVVDKKGCVPIIDYKQIEKGTNNFKESNILGEGGFGCVYKARLDDNLVVAVKKLHCEKSQYAEKEFENEVDLLSKIQHPNIISLLGCSSHEDTKFLVYELMQNGSLETQLHGPSRGSALTWHMRMKIALDTARGLKYLHEHCCPPVIHRDLKSSNILLDASFSAKVSDFGLAIIDGSQNKININLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPLQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRVSQMTQQLFFPIDPCTQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1570 441 Gene3D Phosphorylase Kinase; domain 1 107 216 - -
Lal8g1570 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Lal8g1570 441 Pfam Protein kinase domain 141 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1570 441 SMART serkin_6 140 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1570 441 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Lal8g1570 441 PANTHER BNAA04G14780D PROTEIN 19 431 - -
Lal8g1570 441 SUPERFAMILY Protein kinase-like (PK-like) 122 411 IPR011009 -
Lal8g1570 441 CDD STKc_IRAK 146 414 - -
Lal8g1570 441 Gene3D Transferase(Phosphotransferase) domain 1 217 416 - -
Lal8g1570 441 ProSiteProfiles Protein kinase domain profile. 140 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1570 441 PANTHER OS01G0750732 PROTEIN 19 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1570 Lal-Chr8 20024752 20028974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1570 4 357 Receptor kinase-like Gene Family AT1G80640 45.777 6.04e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lal8g1570 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1570 - - lang:109358848 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1570 8 20024752 20028974 Lal8g1570 8 20024752 20028974 ECH
Lal8g1570 8 20024752 20028974 Lal21g0317 21 2119601 2125415 PCT
Lal21g0317 21 2119601 2125415 Lal8g1570 8 20024752 20028974 PCT