Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1561 ATGGATGACTCATTCAATTGGCTATCTTCAATCCCTCTTTCTCCTATAAATTCTTCCTTACCACCTTATCTTCAAGAATCTAAAGCTCATAACCCCTTCTCTCTTGAGACCTCAATGGATGAAAACATGGATAGTCTTTTCCAAAATCATGATTGGAATGTAATCAATTCTCATAGCTGCAATGAAATTCTAGATGTTGAAGATTTTCTAGGTGTGAGAAGCTCTGAAAATCACTCTGATCTTGTACCCTTAAATGATCTAGATCACCTCTTCACAAACAACAGTTTAGAGGTCATGCCAATGGAAAACTCACTTGTTGCTGCAACTAACAATGGCAACTATGAATATCAAGAAAACAATGCTAACAATAATATGCAACCATTGACATTATCCACTGGAAATGATGGTAATAAGGATTCAACAAACGAAAGAAGTGGAGATAATAATAATACAAACAATGATGTTGAAGTTGCATGCAGAAATTCTTCGCAAAACTCTAGGCAGAGAAAACCAAAATATCGTGGTGTATCAAGGCATGTATCTACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCGTTAAAAGAGAAGGAAAATCAAAAAAAGGTTACCAAGGTGGGTATGACTCAGAAGAGAAAGCAGCTAGGGTCTATGATTTAGTTGCCCTAAAGTACTGGGGGGAATCTGCAACTACCAACTTTCCTATTGGTAACTATGAGAAGGAGTTAGAAGAAATGAAGAACATAACCAAACATGATTATGTGGCCGCAATTAGAAGGAAGAGTAGTGGATTCTGTAGGGGTGCATCAATGTATCGTGGAGTCACAAAGCACACCAAAAATGGAAAATGGCAAGCAAAGATGGGCAGGGTTGGTGGAGAAAAAGACGTTTATTTAGGGACATATAGTACTGAAGAAGAAGCAGCAAAAGCTTATGATATTGCTGCCATAAAGTTTAGAGGCCCTACTGCTGTGACCAATTTTGATATCAATTGTTATGATGTTAAATCTATCATTGAAAGCAACACTCTCCCATTAAAGGGAGGAGCTGGTAAAATACTAGAAGACAGTACTGAAGCTGTGGAATCTTCTAGAGAAAGGGAAGAGATGACATCATTATTAGGTTCATCAAGCACAAGCAATGTCCAAGGTCATGGTTACCCTCTACAAAACCAAGCCATGTCTTGTCACAATGATACTAATCAATACCCTCAATTTTATAATTTGAGCTATGTTAAAACACAGCTCGAGTTATACCAAAAAAAACAAAATGACTCAAACTATGGTCGGTTGAATAACAACCAAATTCAGAACGACCCTACTATGCCCCAAGGGTATATGAACATAGGGTCTTCTTCTTCATCTATAATGGACAACAATGGTGGTGGTTCTATTGATTGGAGTTATAATGGCGTTGGTTTTACAGGGAATGATAATAACAATGGTCTTGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGTCAATGATGGTCTAGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGACAACAATGGTGGTGATTCTATTGATTGGAGTTATGATGGAGTTGGTTTTATAGGGAATAATAATAACAATGGCCTTGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGTCAATAATGGCCTTGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGTCAATAATGATTTGGTTGGAATGACTCCAAATTCTTCTTCATCTTTGATGGACAACAATGGTGATGGTTCTATTGACTGGAGTTATAATGGAGTTGGTTTTATAAGGAATAATAACAATGACCTTGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGTCAATAATGGTCTGGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGGACAACAATGGTGGTGATTCTATTGATTGGAGTTATATTGGCGTTGGTTTTACAAAGAATAATAATAACAATGGTCTTGTTGGAACGACTTCAAATTCTTCTTCATCTTTGATGGTCAATAATGGTCTTGTTGGAATGACTTCAAATTCTTCTTCATCTGTGATGGACAACAATGGTGGTGGTTCTATTGATTGGAGTTATAATGAGGTTGGTTTTATAGGGAACAATAACAATGATCTAGTTGGAATGACTTCAAATTCTTCTTTATCTTTGATGGTCAATAATGGCCTTGTTGGAATGACTTCAAATTCTTCTTCATCTGTGATGGACAACAATGACGGTGGTTCTATTGATTGGAGTTATAATGGGGTTGGTTTTATAGGGAACAATAACAATGGTCTAGTTGGAATGACTTCAAATTCTTCTTCATCTTTGATGACCAATAATGGTCTTGTTGGAATGACTTCATATTCTTCTTCGAGTAAAGCCGAGGATTTGTCTTTTATGGTTGATTATGACATTGGTTCTAATGGATATAGCGGCTGGTTGATGGATTCCATCAATGCTTCAAATGCTTGA 2493 0.3642 MDDSFNWLSSIPLSPINSSLPPYLQESKAHNPFSLETSMDENMDSLFQNHDWNVINSHSCNEILDVEDFLGVRSSENHSDLVPLNDLDHLFTNNSLEVMPMENSLVAATNNGNYEYQENNANNNMQPLTLSTGNDGNKDSTNERSGDNNNTNNDVEVACRNSSQNSRQRKPKYRGVSRHVSTGRYEAHLWDNSVKREGKSKKGYQGGYDSEEKAARVYDLVALKYWGESATTNFPIGNYEKELEEMKNITKHDYVAAIRRKSSGFCRGASMYRGVTKHTKNGKWQAKMGRVGGEKDVYLGTYSTEEEAAKAYDIAAIKFRGPTAVTNFDINCYDVKSIIESNTLPLKGGAGKILEDSTEAVESSREREEMTSLLGSSSTSNVQGHGYPLQNQAMSCHNDTNQYPQFYNLSYVKTQLELYQKKQNDSNYGRLNNNQIQNDPTMPQGYMNIGSSSSSIMDNNGGGSIDWSYNGVGFTGNDNNNGLVGMTSNSSSSLMVNDGLVGMTSNSSSSLMDNNGGDSIDWSYDGVGFIGNNNNNGLVGMTSNSSSSLMVNNGLVGMTSNSSSSLMVNNDLVGMTPNSSSSLMDNNGDGSIDWSYNGVGFIRNNNNDLVGMTSNSSSSLMVNNGLVGMTSNSSSSLMDNNGGDSIDWSYIGVGFTKNNNNNGLVGTTSNSSSSLMVNNGLVGMTSNSSSSVMDNNGGGSIDWSYNEVGFIGNNNNDLVGMTSNSSLSLMVNNGLVGMTSNSSSSVMDNNDGGSIDWSYNGVGFIGNNNNGLVGMTSNSSSSLMTNNGLVGMTSYSSSSKAEDLSFMVDYDIGSNGYSGWLMDSINASNA 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1561 830 SUPERFAMILY DNA-binding domain 172 236 IPR016177 GO:0003677
Lal8g1561 830 SUPERFAMILY DNA-binding domain 270 330 IPR016177 GO:0003677
Lal8g1561 830 MobiDBLite consensus disorder prediction 115 170 - -
Lal8g1561 830 Pfam AP2 domain 171 228 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 Pfam AP2 domain 272 321 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 ProSiteProfiles AP2/ERF domain profile. 271 329 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 9 481 - -
Lal8g1561 830 ProSiteProfiles AP2/ERF domain profile. 172 235 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 MobiDBLite consensus disorder prediction 115 176 - -
Lal8g1561 830 CDD AP2 270 331 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 CDD AP2 171 236 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 481 - -
Lal8g1561 830 Gene3D AP2/ERF domain 172 237 IPR036955 GO:0003700|GO:0006355
Lal8g1561 830 Gene3D AP2/ERF domain 271 331 IPR036955 GO:0003700|GO:0006355
Lal8g1561 830 SMART rav1_2 271 335 IPR001471 GO:0003700|GO:0006355
Lal8g1561 830 SMART rav1_2 172 241 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1561 Lal-Chr8 19949449 19953045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1561 6 463 AP2-EREBP Transcription Factor Family AT1G51190 47.893 5.25e-133 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Lal8g1561 AP2 1.4e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1561 K09285 - pvy:116115844 480.33