Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1560 ATGGCAAAGAAGGAGAATCCCCTGGTGTTTATGGATGTGTCCATAGATGGGAGTCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGACATCGCTCCAAAGACTGCAGAAAACTTCCGTGCACTATGCACAGGAGAAAAAGGAGTCAGTCCAAACACTGGAAAACCGCTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGATCCATTGTGCAGGGTGGTGATTTTGTCAATCGAAACGGGACTGGGGGAGAAAGCATATATGGTTCTAAGTTCCCAGATGAGTCACCTAGGCTAAAACATGATGCTACAGGCCTTTTATCCATGCCAGTTGCTAATCGTGACATTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGAGCACCATCTTGATAGGAAGAATGTAGTCTTTGGCAAGCTTGTGCAAGGTCTTAATTTATTGAATAAAATTGAAGATGTGGGTGATGAAGGAGGTCATCCAACCGTAACTGTTAAAATAATTAATTGTGGTGAATATACCGAGGATGGGAAAAAGGTAAATAAATCAAAAATAGGAAAGCATGGATCCTCTGGAGCTAATAGTCTTGAAGCTCGACGGAAGGGAAAGCAGAAAAAATCTTCAAGAGACAGAAGGAAAAAGAGAAAATACTACTCTTCTGAATCAGAGAGTTCTTCAGATTCAGATACAGAATCTTCAGAAAGTGATAGTGATTATGATTCAGACACATCTTCATCATCTGACACAAGTTCGTCTGGGGCTGACAAGCGAAGGAAGAGAAAGAGATCTAGGAAAGATAAACATAGACATGGAAAAAGAAGAGATAAACGCCGAGACAAAAGGCGAAGGAAACATGATAAGAAATCAAAGCGTACATCAAAAAGGGAATCAGGTAGTCTTATTGATTCAGATGGTGGAAGTAAGGGTGACAATAGCTCTGATAGCAAAAGTCTCAATGCTCAATTGAAAGATCAGAAGAATAAGGACCAATCTCCTAAAAATGCTGAATTTCAGTCTCCCTTAGTTGTGGAAAAAGAGTTACGTCCCATGCATGATAAAGAGAGAGAGGAAGTAATTATGCTAGAGAAGGAAGAACTCCCTAAGGAAAATGGAGGGGGGCGTAGCAATGGCGTTGCAGCCAACTATAGATCTGACAGGAGTGAGGAGAGGCAGCATGACACGATGGATGATCATCCAGACAAATTTAGGAGCCGAAGCACGAGTCCTAAGCGACCCATGAGTAAGAGTATTAGTCCCAGGCGTGAGAGCAAGAGCACGAGCTTAAGTCCAAAAAGGATGTTGAGCCGAAGTCCAAGTGTTGGTGGTAGAAGTCCCCATGCTCCATCAAGAAGAAGCATGAGCAGGAGTCCTGTTAGAAGCATCGGCAGGAGCCCAGTGAGGAGCAAGAAGAGGATAAGTGTCAGTAGAAGCCCAGTTATAAGTCATGACCGTAGAAGTGTCAGAAGCCCAGTGAGAACTCGCGATCGTACAAGTCTAAGTAGAAGCCCCGTGAGAACTCGCGATGATAGAAGTGTCAGTAGGAGCCTTGTAAGATCCCTTTCTCAAAGCCGCCAGAACAGAAGTTCTCCAAGAGCATCATCAAGAAGAATGGTCAGCAGAAGCCCTGTAAGAGAGTCAAGAAATAGTGTAAGCAGGAGTCCAATCAGATCATCTGCCAGAAGCTTAAGCAGAAGCATTAGCCGAAGTCCAGCCAGAGCGCCAGGCAGAAGCAATTGCCGCAGTTATTCTAGGAGCCGTAGCCCAGTTCGTAGAGTAAGGACACCTAGTAGGAGTGTATCGAGGAGTGTGTCACCTAATGGTTCACCAAAGCGGATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAAAACTCCCTCCCGTTCTCCTGTGAGATCATACCGCTTTAACGGAAGAGGTGACCGTGACAGATATTCAGGATACAGAAGATACTCTCCCAGGCGTTACAGGAGCCCACCACCACGCAGAAGAACTTCACCAAGGTACCAAAGCAGGAAGAGCAGGACGCCATCTGTATCACCCAGCCCACGCCACCGTGCTCAAAGATATAGCCGAAGCCGTAGCCCAGTTCGCAGTCGATCGCCTGTGGAGCCACGCCGACCTCTGTCCAAAAGCAGGAGCCTGTCACGATCTCAATCTCGATCAAAATCTTCACAGGAGGCACAATCTCCACATAAAGTGATCCGAGATAACAGATCAAGGTCATCATCTGGAAGCCCAAATGGAAGGAAAGGCCTGGTCTCATATGGAGATGGTTCTCCTGACTCTGGCTAA 2316 0.4534 MAKKENPLVFMDVSIDGSPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKPLHYKGSFFHHIVKGSIVQGGDFVNRNGTGGESIYGSKFPDESPRLKHDATGLLSMPVANRDILGSHFIITLKAEHHLDRKNVVFGKLVQGLNLLNKIEDVGDEGGHPTVTVKIINCGEYTEDGKKVNKSKIGKHGSSGANSLEARRKGKQKKSSRDRRKKRKYYSSESESSSDSDTESSESDSDYDSDTSSSSDTSSSGADKRRKRKRSRKDKHRHGKRRDKRRDKRRRKHDKKSKRTSKRESGSLIDSDGGSKGDNSSDSKSLNAQLKDQKNKDQSPKNAEFQSPLVVEKELRPMHDKEREEVIMLEKEELPKENGGGRSNGVAANYRSDRSEERQHDTMDDHPDKFRSRSTSPKRPMSKSISPRRESKSTSLSPKRMLSRSPSVGGRSPHAPSRRSMSRSPVRSIGRSPVRSKKRISVSRSPVISHDRRSVRSPVRTRDRTSLSRSPVRTRDDRSVSRSLVRSLSQSRQNRSSPRASSRRMVSRSPVRESRNSVSRSPIRSSARSLSRSISRSPARAPGRSNCRSYSRSRSPVRRVRTPSRSVSRSVSPNGSPKRIRRGRGFSERYSYARRYKTPSRSPVRSYRFNGRGDRDRYSGYRRYSPRRYRSPPPRRRTSPRYQSRKSRTPSVSPSPRHRAQRYSRSRSPVRSRSPVEPRRPLSKSRSLSRSQSRSKSSQEAQSPHKVIRDNRSRSSSGSPNGRKGLVSYGDGSPDSG 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1560 771 MobiDBLite consensus disorder prediction 478 516 - -
Lal8g1560 771 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 MobiDBLite consensus disorder prediction 180 771 - -
Lal8g1560 771 Gene3D - 1 175 IPR029000 -
Lal8g1560 771 MobiDBLite consensus disorder prediction 594 609 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 642 657 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 662 677 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 517 538 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 678 693 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 306 322 - -
Lal8g1560 771 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 329 - -
Lal8g1560 771 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 MobiDBLite consensus disorder prediction 719 736 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 385 409 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 411 436 - -
Lal8g1560 771 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Lal8g1560 771 MobiDBLite consensus disorder prediction 258 293 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 347 372 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 545 587 - -
Lal8g1560 771 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lal8g1560 771 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 329 - -
Lal8g1560 771 MobiDBLite consensus disorder prediction 615 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1560 Lal-Chr8 19927632 19934374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1560 25 170 U-box Gene Family AT5G67530 39.189 1.98e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1560 K09566 - jre:109001815 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1560 8 19927632 19934374 Lal8g1560 8 19927632 19934374 ECH