Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1522 ATGTGGTTGCAAAAGAATAGTTGGGATAGGAAGGATGGTGTGAATGGAATAGTGGCAGTGGCAATAGACAAAGATAAAGGCAGCCAAAATGCATTGAAATGGGCCATTGATCATCTTCTCACAAGAAATGGCACTGTAGTTCTTATCCATGTCAATGTTAAGCAAGCTTCTCTTTCTTCATCAAATTCTATTTCAACCCCGAGGGCAAAAGGTAATGGTATTGGTGAGCAGAGTTCAGTGGTTTCCAAAGACCCTGATGAGCAAACGAAAGAAATTTTCCGGCCATATCGTGTCTTCTGTGCACGAAAAGATATACAGTGCAAGGACATTGTACTAGAAGATGGAGATGTATCAAGAGCTTTAATTGAATACACTTCTCACTCAGCAATTGAGCATTTGGTTATAGGTTCTTCAAATAAAACTGGCTTTCTTAGATTTAGAGCAGCAGATATTCCAGGAACAGTATCTAAAGGTGCACCAGATTTCTGTACAATATATGTTGTTTCTAAAGGAAAGATTCAATCAATGAGATCTGCTTCTCGTCCTGCTCCTTTCTATTCCCCTCTACAAAACCATCCTACTCAAACTTCTCTAAAGTCTGACCAACCAGACCCACCGCGTGTCCCTCTCTTTAGAGGTAGTGTTAAAGGAGAAAGAAGATCACAGGAAGCTGCTCCTCCACGAAGATCCATCGATGCTCCTCCACGCATATCACACGATGGAACAACAGATTCTTTCAGGTCACCATTCACTAGGAAAGGAATGGCAGAGAGGTATGGTGAAATTTCCACACCAGGTGATAGTGACATAACATTTGTAAGCTCAGGAAGATCAAGTATAGACAAATTGTTCCCTGCATTAACTAATAGTTCAGACTCAGGGATATCCAATCCTAGATTATCATATAGTTCAGATACAGATGCAAACTATAGCTTTGAGTCAATCAATTTTGGAAGGAGGTCTATTGATATCAGCTCTCCTGATCACTCTTTCTCAAGTGATGGCTTCTCATCGACTACATCACAGGCTGCGGATGATGTGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTGAAGCAAACTATGGAAATGTATAGCACAGCATGTAAAGAAGCACTCTCAGCACAGCAGAAGGCAGTAGAACTCCAAAGATGGAAATTAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGATAGCTGAAGAGGCTGCATTGGCAATGGCAGAAAAGGAAAGGGCAAAATCGAAAGCAGCCATTGAGACTGCTGAAGCACAAAAGAGGATTGCAGAACTGGAATCAAAGAAAAGACTTAATGCAGAAATGAAAGCACTTAAAGAATCAGAGGAGAAACGAAGAGCGCTTGATGCTTTAGCAAACAAAGATGTAAGGTATAGAAGGTATTCGATTGAAGAGATTGAAGAAGCCACAATTTTTTTTGCAGAGTCCTTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTATAAGTGCCTTTTGGATCATACACCTGTTGCAGTAAAAGTCTTGCGGCCAGATGCAGCGCAAGGAAGGTCACAATTTCAACGAGAGGTTGAGGTACTGAGCTGCATACGGCATCCTAACATGGTCCTCCTCCTAGGAGCTTGCCCTGAGTATGGTTGCCTTGTTTATGAGCACATGTCACATGGAAGCTTAGACGATCTCCTTTTCTGCAGAGGAAAAAGTCCTGCACTTCCATGGCAGCTTAGGTTCAAGATTGCGGCTGAAATCGGCACTGGTTTGTTGTTCCTCCACCAGACAAAACCTGAACCTCTTGTCCACAGGGACTTAAAACCAGCAAACATATTGCTCGACCGAAACTATGTCGCGAAGATCAGCGATGTAGGTTTAGCTAGGCTAGTTCCACCATCTGTCGCTGACAATGTGACTCAATACCGAATGACATCGGCTGCCGGAACTTTTTGTTATATAGATCCTGAGTATCAGCAGACAGGAATGTTAGGTGTGAAATCTGATATATATTCTCTTGGGATAATTTTCCTACAAATTTTGACAGCAAGGCCACCAATGGGATTGACACATCATGTTGAAAGAGCTATTGAGAAAGGAACATTTCTTGACATGCTTGATCCAAAAGTGCCTGATTGGCCAATAGAGGAGGCCTTAACCCTTGCAAAGATTGCAATAAGATGTGCTGAATTAAGGAGGAAAGACAGACCTGATCTTGGAAAAGAAGTCTTACCAGAACTAAACAGGTTAAGAGAACTGGCTGAAAGTAATGATCAAAATTTAGTGTTGAGTGACTTTATAAGCCCATCCAACCAAAGCCAAGTTTCTTTTCAGGATGGAGGGAGTTCTTCACATCCTTCTTCTGGGGAGAGCTCAAGAAACACATCAAGTCCTTTTTGA 2382 0.4219 MWLQKNSWDRKDGVNGIVAVAIDKDKGSQNALKWAIDHLLTRNGTVVLIHVNVKQASLSSSNSISTPRAKGNGIGEQSSVVSKDPDEQTKEIFRPYRVFCARKDIQCKDIVLEDGDVSRALIEYTSHSAIEHLVIGSSNKTGFLRFRAADIPGTVSKGAPDFCTIYVVSKGKIQSMRSASRPAPFYSPLQNHPTQTSLKSDQPDPPRVPLFRGSVKGERRSQEAAPPRRSIDAPPRISHDGTTDSFRSPFTRKGMAERYGEISTPGDSDITFVSSGRSSIDKLFPALTNSSDSGISNPRLSYSSDTDANYSFESINFGRRSIDISSPDHSFSSDGFSSTTSQAADDVEAEMRRLKLELKQTMEMYSTACKEALSAQQKAVELQRWKLEEERRLEEARIAEEAALAMAEKERAKSKAAIETAEAQKRIAELESKKRLNAEMKALKESEEKRRALDALANKDVRYRRYSIEEIEEATIFFAESLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMSHGSLDDLLFCRGKSPALPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGTFLDMLDPKVPDWPIEEALTLAKIAIRCAELRRKDRPDLGKEVLPELNRLRELAESNDQNLVLSDFISPSNQSQVSFQDGGSSSHPSSGESSRNTSSPF 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1522 793 CDD STK_N 17 171 - -
Lal8g1522 793 SUPERFAMILY Protein kinase-like (PK-like) 463 733 IPR011009 -
Lal8g1522 793 Gene3D Transferase(Phosphotransferase) domain 1 551 762 - -
Lal8g1522 793 Gene3D HUPs 17 169 IPR014729 -
Lal8g1522 793 ProSiteProfiles Protein kinase domain profile. 478 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1522 793 MobiDBLite consensus disorder prediction 179 249 - -
Lal8g1522 793 MobiDBLite consensus disorder prediction 61 86 - -
Lal8g1522 793 Gene3D Phosphorylase Kinase; domain 1 456 550 - -
Lal8g1522 793 Pfam Protein kinase domain 481 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1522 793 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 789 - -
Lal8g1522 793 MobiDBLite consensus disorder prediction 179 202 - -
Lal8g1522 793 SMART serkin_6 478 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1522 793 CDD STKc_IRAK 484 744 - -
Lal8g1522 793 PANTHER OS02G0152300 PROTEIN 11 789 - -
Lal8g1522 793 MobiDBLite consensus disorder prediction 766 793 - -
Lal8g1522 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Lal8g1522 793 Coils Coil 370 450 - -
Lal8g1522 793 Pfam Universal stress protein family 18 150 IPR006016 -
Lal8g1522 793 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 147 - -
Lal8g1522 793 MobiDBLite consensus disorder prediction 61 82 - -
Lal8g1522 793 Coils Coil 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1522 Lal-Chr8 19538439 19543916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1522 1 771 Receptor kinase-like Gene Family AT1G78940 57.089 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal8g1522 Pkinase 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1522 - - gmx:100779981 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1522 8 19538439 19543916 Lal25g1097 25 14281908 14290006 LSH