Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1518 ATGTCAATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAAGCAAGCCAACTCTTCAAAAACCATTACCACCACAACCAACAACAACAACAACACCAGCATCAGTAGCAGTAAAAGTATGAAGTTTCTGAAAAGAACACTTTCTTTATCAGAACGTGAAGGAGGAGGAGGATCAAGCAACAATGTTGTTCCAAAAGGTTACCTAGCTGTTTGTGTTGGTGAAGAACTTAAGAGATTCATTATACCAACTGAATATTTGAGTCATCAAGCCTTTCAGATTCTACTGAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAGCTGGTGTTCTAAGAATTCCTTGTAATGTATCAGTTTTTGAAAGTATATTGAAGATGGTGGAGGGAAAGAAAGACAAGTTTTCTTCCACTACTCAAGAATGTAGGCTTAGTGTTGAAGAAATAATGGGTTTTTGTTCCTTAGAAAACCAACCTTCTTATTCTTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 549 0.3679 MSMDPKKSNKIREIVRLQQILKKWRKQANSSKTITTTTNNNNNTSISSSKSMKFLKRTLSLSEREGGGGSSNNVVPKGYLAVCVGEELKRFIIPTEYLSHQAFQILLREAEEEFGFQQAGVLRIPCNVSVFESILKMVEGKKDKFSSTTQECRLSVEEIMGFCSLENQPSYSSHHPQSPLCR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1518 182 Pfam Auxin responsive protein 50 138 IPR003676 GO:0009733
Lal8g1518 182 PANTHER SAUR FAMILY PROTEIN 7 182 - -
Lal8g1518 182 MobiDBLite consensus disorder prediction 28 51 - -
Lal8g1518 182 Coils Coil 7 27 - -
Lal8g1518 182 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 182 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1518 Lal-Chr8 19486063 19486611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1518 3 182 Calmodulin-binding Proteins AT4G31320 51.741 8.89e-63 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1518 K14488 - gmx:100799598 233.802