Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1513 ATGGACGGTGACCGGAAAATCCCTGTCCCATCCGATCAGCCCATAGATGGTGTTCAGAAAACTAGAGCATTACAAGGGAGGACTACTGGCCCTACAAGGCGCTCTACAAAGGGGCATTGGACACCTGAGGAGGATGATATCTTGAGAAAGGCTGTTCAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTTTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTTCTAAATCCCGAGCTTATCAAAGGTCCATGGTCTAAAGAGGAAGATGAAGTAATTATTGAATTGGTGAACAAATGTGGCCCTAAAAAATGGTCTACGATTGCACAACATTTACCTGGACGTATTGGTAAGCAATGTAGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCATGGACACAAGAAGAGGAGTTAGCTCTAATACATGCTCATCAGATTTACGGGAACAAATGGGCGGAGTTAACGAAGTTCTTGCCTGGACGGACAGACAATGCTATTAAAAATCACTGGCACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTCACGTCAGGCTTGCTTAATCAGTTCCAATCTGTGCCTCATGTGGGAAATTCAAATCAATCGATGGTTTTAGCCTCTTCGAGCTTGCAGTGTGGAGATGATAATGGTTCGAAGCAGACAGAAGGAGAGGAAGTTTCAGAGTGTAGTGAGTCAGCTAATGCTGGTCATTTTCCATTGGCAATAGATATGAGCAATGCTGGCTTACAAACTAGAGAGGATTATAGACGAAATGGAGATTGTAATCATGAAAAGGATCATAGTTCGTGTCAAGCATGCTGTTCAGAGCCATATTACGTGTCTCCTGCTGATGTTACTATATGCGACCCAGACAATGCTCACACTTCTCAATTTATTGATCAGAAATTCTTACATGAAGCCGGAAATCCCATTAGTGGGGATTGTCAGATTAATTTTCATTCCTTCCCCAATATCTCATCAGAGGGCTTGGTGCAGGAATCCTCACAATTGCAAAGAGATTGTATAGCTCCTGATGAAATCTGCGACTATAATCCATTTCAAACTTCAGTGAGTTTAGGTGTTTCCACATCCATGGGACCTACTTCTACAGATTCTGTCAGACCAGAGCTGATATCTGATGATACATGTGGCAGAGTCTTTTTCTCAGAGGCAGGGAATGATGTATGTTTTTGCTCCGGAGATAATAGAGGTGTAGATTTTGTCGGCTTTTCTGGATATACTTCATTTCTTTGCCAGTCATGTGATATCCATATGCCTGAAACCAGTGGAACCTCAACTTCACAGCAAAGTTGTCCTCCGTGTTTTTATACTTTTAATACTTCATCCTCCCAATCAGTTCCACCAGTAATTTCTGCTAGTGGCCAATGTCTAATCTATACTGCCCATGACGATCAATTCTTTGGGCCCGAGGATCAGCAGATTGTTTCTGGGGCACCTGATAATTTCGTTTATGCCAATGACATGTCAAATTCTCCTCATGTTCATGGTATAGATAGTGAAGTAATGCAAGAGCCACCAGATAATGCGAAGGATACTTCAAAGTTGGTCCCTGTAAAGAGTTTGGGCTTTGCATCAGATTCTATCCAAACTTGTTATCCAACAGATGAAAATCCCACCGCACATATAAAAGAGGACGATGCGGGAGCTCTATGTTATGAGCCTCCTCATTTTCCTAGCTTGGATATTCCTTTCTTCAGTTGTGATCTTGTACAATCTAGGGCTGATATGCAGCAAGAATTTAGTCCCCTTGGTATCCGCCAGTTTATGATGTCGTCAATGAACTGTCTAACACCTTTCAGGTTGTGGAACTCACCCTCTTGTAATGATAGTCCAGATGCATTGTTGAAAAGTGCAGCCAAAACTTTCACCGGCACACCGTCCATATTAAAGAAACGTCGCCGTAGTCTGTTATCACCATTATCGAATAAAAGAATTAGCAAGAAGCTTGAGACTGACATGACAGCCACGTTGACCAAAACTTTTCCCACCTTTAAAGGCATCTTTAATGGAAACGAGACTTCAGAAGCAGTTTTGGTTTCTCCAACTGCATTGCCAAATAGGAACTCTAATGTGTCAGTTGATGATGATAAAGAAAATTGTGGATCAGCCTTTAAAGGGGAACGAGTGGAGGAGAAAATGAAATCTGCAATTTCGGACAAAATAAAGTCAGAAAACGATACCATTGACAGTAATGCTCAGGATGAAATTAAGAAGCGACCACTTGACATTGATGCTAAAATGAAGAGCGTTGTTGGTGCTGCTGCTGTTGCTAAGATTGTGCACCAACCTTCTGGTGTTTTGGTTGAACATGATATAAATGACAGGTTACTGTATTCTCCTGATCATGCTGGTTTTAAGTCAGACAATGTTCTCGATTCAAGTGCTAGAACTCCGAAGAAATTGGACAATAACAGTTTGGAAAAAGCTCCGAATCGGAGCATCACTTTGAAATTATCTTCTGAAAATCCAGGCTCAAGTGTTAACTTTCCGTGTGTTCGTGCAAAGGAGCATGACAGACTTTCAGTTGCTGTTACTTGTGTACAATCTGTCTGTTCATCAGCCCCAGGGGAGAATTCAGGGGATCAAACCAGAAATGATTGCCCTTTTGAAACTAGTAACATATTTGGTTCAACACCTTTCAGGAAAAGCCTTGAATCACCTTCTGCATGGAAATCTCCATGGCTCTTCAACAATTTTCTGTCCAGTCCCAGATTTGCTACCGAAATTACTATCGAGGATTTTGGGTATTTCATGAGCCCGGGCGATAGAAGCTATGATGCAATCGGGTTGATGAAACAGGTCAGTGAACAAACTGCTGCCACATATGCCAATGCTCAGGAGATTTTGGGAAATGAATCTCCTACGACGTTGAAGAAGGATGCAACTGGAAACAAGGATGCGAACCGGGAAAATAATGATCCGCGCAAACAGGCTGGAAACAATTCTCAATTGGCTTCAAATTCTTTGATGGAGCGGCGAGTACTCGATTTTAGCGAATGTGGAACACCTAGCAAGGCTGATAACAGCAAATCCTCCTCAGCTTTGAGCTTCTCAAGTCCTACTTCATACTTGCTCAAAGGTTGTAGATAG 3147 0.4179 MDGDRKIPVPSDQPIDGVQKTRALQGRTTGPTRRSTKGHWTPEEDDILRKAVQRFKGKNWKKIAEFFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDEVIIELVNKCGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIHAHQIYGNKWAELTKFLPGRTDNAIKNHWHSSVKKKLDSYFTSGLLNQFQSVPHVGNSNQSMVLASSSLQCGDDNGSKQTEGEEVSECSESANAGHFPLAIDMSNAGLQTREDYRRNGDCNHEKDHSSCQACCSEPYYVSPADVTICDPDNAHTSQFIDQKFLHEAGNPISGDCQINFHSFPNISSEGLVQESSQLQRDCIAPDEICDYNPFQTSVSLGVSTSMGPTSTDSVRPELISDDTCGRVFFSEAGNDVCFCSGDNRGVDFVGFSGYTSFLCQSCDIHMPETSGTSTSQQSCPPCFYTFNTSSSQSVPPVISASGQCLIYTAHDDQFFGPEDQQIVSGAPDNFVYANDMSNSPHVHGIDSEVMQEPPDNAKDTSKLVPVKSLGFASDSIQTCYPTDENPTAHIKEDDAGALCYEPPHFPSLDIPFFSCDLVQSRADMQQEFSPLGIRQFMMSSMNCLTPFRLWNSPSCNDSPDALLKSAAKTFTGTPSILKKRRRSLLSPLSNKRISKKLETDMTATLTKTFPTFKGIFNGNETSEAVLVSPTALPNRNSNVSVDDDKENCGSAFKGERVEEKMKSAISDKIKSENDTIDSNAQDEIKKRPLDIDAKMKSVVGAAAVAKIVHQPSGVLVEHDINDRLLYSPDHAGFKSDNVLDSSARTPKKLDNNSLEKAPNRSITLKLSSENPGSSVNFPCVRAKEHDRLSVAVTCVQSVCSSAPGENSGDQTRNDCPFETSNIFGSTPFRKSLESPSAWKSPWLFNNFLSSPRFATEITIEDFGYFMSPGDRSYDAIGLMKQVSEQTAATYANAQEILGNESPTTLKKDATGNKDANRENNDPRKQAGNNSQLASNSLMERRVLDFSECGTPSKADNSKSSSALSFSSPTSYLLKGCR 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1513 1048 MobiDBLite consensus disorder prediction 1 40 - -
Lal8g1513 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Lal8g1513 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Lal8g1513 1048 MobiDBLite consensus disorder prediction 970 1004 - -
Lal8g1513 1048 Gene3D - 89 140 - -
Lal8g1513 1048 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Lal8g1513 1048 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Lal8g1513 1048 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Lal8g1513 1048 MobiDBLite consensus disorder prediction 1021 1042 - -
Lal8g1513 1048 SMART sant 88 137 IPR001005 -
Lal8g1513 1048 SMART sant 140 188 IPR001005 -
Lal8g1513 1048 SMART sant 36 85 IPR001005 -
Lal8g1513 1048 CDD SANT 40 83 IPR001005 -
Lal8g1513 1048 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Lal8g1513 1048 Gene3D - 142 204 - -
Lal8g1513 1048 MobiDBLite consensus disorder prediction 1019 1048 - -
Lal8g1513 1048 PANTHER TRANSCRIPTION REPRESSOR MYB5 5 1047 - -
Lal8g1513 1048 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Lal8g1513 1048 PANTHER MYB PROTEIN-RELATED 5 1047 - -
Lal8g1513 1048 CDD SANT 143 183 IPR001005 -
Lal8g1513 1048 MobiDBLite consensus disorder prediction 22 36 - -
Lal8g1513 1048 CDD SANT 91 135 IPR001005 -
Lal8g1513 1048 Gene3D - 36 88 - -
Lal8g1513 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Lal8g1513 1048 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Lal8g1513 1048 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Lal8g1513 1048 SUPERFAMILY Homeodomain-like 35 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1513 Lal-Chr8 19435167 19442813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1513 5 1048 MYB Transcription Factor Family AT4G32730 41.040 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal8g1513 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1513 - K09420 aprc:113848458 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1513 8 19435167 19442813 Lal8g1513 8 19435167 19442813 ECH
Lal8g1513 8 19435167 19442813 Lal25g1110 25 14480383 14488224 LSH
Lal8g1513 8 19435167 19442813 Lal21g0405 21 2801484 2813229 PCT
Lal8g1513 8 19435167 19442813 Lal4g0274 4 1757014 1765373 PCT
Lal21g0405 21 2801484 2813229 Lal8g1513 8 19435167 19442813 PCT
Lal4g0274 4 1757014 1765373 Lal8g1513 8 19435167 19442813 PCT