Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1510 ATGGAGAGGGTTGTTGGAGGAAAATATAAGATTGGTAGAAAAATTGGAAGTGGATCATTTGGTGAAATCTACATTGGTGGTATTCCAAGTTTGAAATGGTGTGGTAGTGATGGAGACAATAATGTTCTAGTTATTGAAATTCTTGGACCTAGTCTTGAAGACCTTTTTTATTACTGTGGGAAGAAATTTTCACTAAAAACTGTTCTCATGTTGGCTGATCAAATGCTTACAAGGATAGAGTATTTACATTCGAAGGGATTTTTGCATAGAGATATCAAACCAGATAACTTCCTTATGGGTCTTGGCAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGTCTTGCAAAAAGATATAGGGACCCTTGTACAAATAAGCATATCCCTTGCAGAGAGAACAAAAACTTAACAGGAACTGTACGTTATGCAAGTTGCAATACTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAATCTCTTGGTTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTACAAGCTGCTACTACAGACCAAAAATTTGACAAGATTTGCAAAAAGAAGTTATCAACTCCTAGTGAGATACTTTGCAAGTCATTTCCTGTGGAGTTTGCTTCTTACTTTCATTATTGCCGCTCCTTGTCATTCGATCAACGACCAGATTATGGATTCTTGAAGTGTCTGTTTCGTGATTTGTTCACTCGTGAAGGATATGATTCTGACAATTTATTAGACTGGACCATCCTAAAGCAACAGCAGATGCAACAGAGAAAAACACAAAATCAATTGAATGCTCAAGTTGCTGTTCCTAGCAATCTAGAACCAGTGAATGTGGATAAGCATAAAGGAGTCAATGATTCAACTCCAATTCCGATGGCAAGACCGTCGGCGAATATTGATCGTCCACGTGTTTCTATGAAGATCATGGCATCTAATGTCCAGAATCTTAATGTCAAGTTTCCAACAGAGAAATATATTATGAACAATGGTTCATCTAATTTTACTCCAATGCCCAGAATCTCAAATGAAAACATTGCCATGCCTAGAATCTCTACCGAAAATATTGTCATGCCTAGAGTCTCGAAACCCGAAAGGCTCATCGGAAACGCAAATCCTGATGCATCAAGCAGTTCTGTTCCTTCGCTACGCCGAGCTTCTTCAATCAAATAG 1191 0.382 MERVVGGKYKIGRKIGSGSFGEIYIGGIPSLKWCGSDGDNNVLVIEILGPSLEDLFYYCGKKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKRYRDPCTNKHIPCRENKNLTGTVRYASCNTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATTDQKFDKICKKKLSTPSEILCKSFPVEFASYFHYCRSLSFDQRPDYGFLKCLFRDLFTREGYDSDNLLDWTILKQQQMQQRKTQNQLNAQVAVPSNLEPVNVDKHKGVNDSTPIPMARPSANIDRPRVSMKIMASNVQNLNVKFPTEKYIMNNGSSNFTPMPRISNENIAMPRISTENIVMPRVSKPERLIGNANPDASSSSVPSLRRASSIK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1510 396 Pfam Protein kinase domain 37 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1510 396 SUPERFAMILY Protein kinase-like (PK-like) 5 253 IPR011009 -
Lal8g1510 396 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1510 396 PANTHER CASEIN KINASE-RELATED 1 26 - -
Lal8g1510 396 PANTHER CASEIN KINASE-RELATED 26 360 - -
Lal8g1510 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Lal8g1510 396 MobiDBLite consensus disorder prediction 370 396 - -
Lal8g1510 396 Gene3D Transferase(Phosphotransferase) domain 1 1 295 - -
Lal8g1510 396 SMART serkin_6 9 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1510 396 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 26 - -
Lal8g1510 396 PANTHER CASEIN KINASE I-LIKE PROTEIN 26 360 - -
Lal8g1510 396 MobiDBLite consensus disorder prediction 377 396 - -
Lal8g1510 396 MobiDBLite consensus disorder prediction 283 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1510 Lal-Chr8 19413696 19421240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1510 54 230 MAP Kinase Kinase Kinase AT1G62400 30.387 3.16e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lal8g1510 Pkinase 4.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1510 K08960 K08959 gmx:100782913 555.058