Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1505 ATGAGTGCTACACTTGATAATAGCTCAAATTCAATTTCATTTTCGTCTACTTCTGAATCAACATCATTGGTATCGTTAAAGAAAGATGGGGAAGAATTAAAGAAAGCAAAGCGAAATCGAGATTCGAACAAGCACCCTATGTATAGAGGGGTTCGGATGCGTAATTGGGGAAAATGGGTGTCAGAAATCCGCGAACCACGCAAGAAATCGCGTATTTGGCTCGGTACATTTCCAACACCGGAAATGGCAGCAAGAGCTCATGACGTGGCAGCTCTTAGTATAAAAGGAGACACCACCATTCTTAACTTCCCCGAGCTTGCAAGCTCGCTTCCTCGGCCGGTGTCATTGGCCCGTCGCGATGTTCAGGCTGCTGCTGCAAAGGCTGCCCAAATGAACAAGTTCGATAAATTGTCATCATTATCATCACCACCACCATCATCAGCACTAGTTTCTTCGGTAAAAACTTCGTCGAAATTGTCTTTGTTGGTTTCTTGTGATGAAGAACTTAGTGAGATCATAGAGTTGCCAAGGTTGGGAACAACCAATGATTGTTTCGGAGAAGAATTTGTGTTTGTTGAATCCGAGGATGCATGGATGTATCAGGCACCAATTCCATGGTTTCAGAACATAGAATATGATGATGGGTATGTTGCTCATGAATTTGCATTTTCAGAGTTTTATCATCACAAGTGA 693 0.4271 MSATLDNSSNSISFSSTSESTSLVSLKKDGEELKKAKRNRDSNKHPMYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGDTTILNFPELASSLPRPVSLARRDVQAAAAKAAQMNKFDKLSSLSSPPPSSALVSSVKTSSKLSLLVSCDEELSEIIELPRLGTTNDCFGEEFVFVESEDAWMYQAPIPWFQNIEYDDGYVAHEFAFSEFYHHK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1505 230 MobiDBLite consensus disorder prediction 1 24 - -
Lal8g1505 230 Gene3D AP2/ERF domain 47 105 IPR036955 GO:0003700|GO:0006355
Lal8g1505 230 MobiDBLite consensus disorder prediction 1 46 - -
Lal8g1505 230 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 9 214 - -
Lal8g1505 230 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Lal8g1505 230 MobiDBLite consensus disorder prediction 25 46 - -
Lal8g1505 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 214 - -
Lal8g1505 230 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1505 Lal-Chr8 19340238 19341006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1505 17 216 AP2-EREBP Transcription Factor Family AT5G11590 58.537 1.21e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal8g1505 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1505 K09286 - gmx:100305349 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1505 8 19340238 19341006 Lal8g1505 8 19340238 19341006 ECH