Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1486 ATGAATTCTGATTTTGTGGAGAAAGATCCAAGCTTGCAGTATGTTCGGTACGATGAGATGTTGGGAAAAGGAGCATTCAAAACTGTATATAGGGCATTTGATGAAGTAAACGGAATCGAGGTTGCCTGGAACCATGTCAATCTTGAGGATGTTTTGCAGTCACCACAGCAGTTGGAAAAATTATATTCTGAAGTCCATCTCCTTAAGTCATTGAAGCATGAAAATATCATTAGGCTCTATAATTCTTGGGTGGATGATAAGAACAAGGCTATCAACATGATTACTGAGTTATTCACCTCTGGGAGTTTGAGGCAGTATCGGAAGAAACATAAGAATGTTGATATGAAAGCCATCAAGAATTGGGCGAGGCAGATTCTTCGAGGCTTATGCTATCTGCATAGTCATAGTCCTCCGATAATTCATAGGGATCTTAAATGTGATAATATTTTTGTTAACGGCAATAATGGACATGTTAAGATTGGAGATCTTGGATTGGCAATTGCCATGCAGAAGCCTACTGCCCGAAGTGTTATTGGTACACCAGAGTTCATGGCCCCAGAGCTATATGATGAAGAATATAATGAACTTGTTGATATATATTCCTTTGGCATGTGTATGCTGGAAATGATCAGCTGTGATTACCCATACAGTGAATGTAAAAATCCGGCCCAAATATATAAGAAAGTTACATCTGGTATAAAGCCTGCTGCTCTTGCCAAAGTAAATGATCCGGAAATGAAGCGATTTATTGAGAAGTGTCTAGTTCCAGCTTCTATGAGATTGCCTGCATCCGAACTATTGAAAGACCCATTCCTTGCAAATGAAAACACAAAGGAGAGCAATCATGATATATTGCATCTTCCTAATCCCCTCCCCAAATTGGTGAATCCACCAATATCTGAGCCTCATCCCATGGAGATAGACTCGAACTTGAGGCATACTTCATCTGGCTCCTCTGTTAGAAGAGTTGAAGATGCTTCTTCAACTTTTGATCTCGTCAGAATGACTGAGAATAATGAATTTAGGTTAAGAGGAGATAAAGATGGTGAAAGTGCAATTTCGCTTATGCTGCGAATTGCCGATACAGATGGTCGAGCAAGGAATATCCATTTTCCATTCTTTATGGATTCTGATACTGCAATTTCAATTGCTGCGGAGATGGTGGAACATCTGGAACTCGCAAGTGAGGATGTAGCTGTCATTGCCGAATTAATACACAACATGATTGTGAAGCTAGTCCCCAACTGGCAACCCTCATCTCAGGACCTTCAATTTCGATCAGATCATTTATGCAGGTCTTCTGATGTTCAGAATGGTGATATAGGAAGTTGCCATTGGCCTCCACTGTCAAGTGATTTTGATACTAAGGCAGTCGATGGGGATTTTGTTATTTCAAAGCATATCGACCGGGAAGATCAGGAGAAGCAAGAATCCATTATGTCAGATATTTCAGCAGAGTATGGGGTTCCAGTTGCCTCAGATTGTAAAGGTTTAGAGCACGGCTTTTCAGTTCTCGATGAATGCTGGAAAGGATCCGATGTCTTCAGTTGCAATTCGGATTTCATGTTTTGTGGTCAAGATGATGGACAAAAGAATAAAGCTAATAATCAATCAGAGAGTCACTCACCAAGCTCTTTGATGAATTCATGTTCGAGTTCATCCGAAATATTTGACATGTCACGCATATGTTCTCTTACTCTCGCTGACAAAGATCTTTCGAGTGATGATTTGCAGGTGGAGCTTGACGCAATAGATGTACAGTATCAACAATGCTTTCGACGGATTGAGAAGATGAGGGAGGAAGCCATAGAAAATGCCAAAAGGAAATGGATAGCAAGGAAGATAATGTCAAAAGGAAATGTATAA 1866 0.4025 MNSDFVEKDPSLQYVRYDEMLGKGAFKTVYRAFDEVNGIEVAWNHVNLEDVLQSPQQLEKLYSEVHLLKSLKHENIIRLYNSWVDDKNKAINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSHSPPIIHRDLKCDNIFVNGNNGHVKIGDLGLAIAMQKPTARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMISCDYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEMKRFIEKCLVPASMRLPASELLKDPFLANENTKESNHDILHLPNPLPKLVNPPISEPHPMEIDSNLRHTSSGSSVRRVEDASSTFDLVRMTENNEFRLRGDKDGESAISLMLRIADTDGRARNIHFPFFMDSDTAISIAAEMVEHLELASEDVAVIAELIHNMIVKLVPNWQPSSQDLQFRSDHLCRSSDVQNGDIGSCHWPPLSSDFDTKAVDGDFVISKHIDREDQEKQESIMSDISAEYGVPVASDCKGLEHGFSVLDECWKGSDVFSCNSDFMFCGQDDGQKNKANNQSESHSPSSLMNSCSSSSEIFDMSRICSLTLADKDLSSDDLQVELDAIDVQYQQCFRRIEKMREEAIENAKRKWIARKIMSKGNV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1486 621 Gene3D Transferase(Phosphotransferase) domain 1 98 280 - -
Lal8g1486 621 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1486 621 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1486 621 PANTHER WNK KINASE 3 614 - -
Lal8g1486 621 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 353 409 IPR024678 GO:0004674|GO:0005524
Lal8g1486 621 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Lal8g1486 621 Gene3D - 351 440 - -
Lal8g1486 621 SUPERFAMILY Protein kinase-like (PK-like) 18 318 IPR011009 -
Lal8g1486 621 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1486 621 CDD STKc_WNK 14 272 - -
Lal8g1486 621 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 614 - -
Lal8g1486 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1486 Lal-Chr8 19151955 19155861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1486 3 614 MAP Kinase Kinase Kinase AT5G41990 52.443 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal8g1486 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1486 K08867 - gmx:100783717 849.351