Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1482 ATGACAGAGATTGCGAGTTCAGTGGTTCACGAGGTTTTGGGACGAAGGATTATTGATGTGGATCAACCAATTGTTGATTACATCGTCAACGTTCTCGCCGACGAAGATTTCGATTTTGGACTCGACGGTGAAGGTGCCTTTGATGCTATCGGAGAGCTTCTCGTCGCCGCCGATTGCGTCGATGATTTCTCCGAGTCTCGCTCCGTATGTAGCAAACTGTCTGAGAAATTCGGAAAGCATGGTTTGGTTAAGGTGAAGCCAGCAGTGCGATCCCTTGCTGTGCCGTTTCGAATGAATGAAGGATTGGATGATGGAGAAGCTCCCAAGAAGAAGCCTGAGCCTGTGGATGGACCTTTGCTATCTGAGCGCGACAAGTTAAAGCTTGAAAGGAGAAAGAGAAAGGATGAACGCCAGAGAGAGGCCCAATACCAAATGCATTTAGCAGAGATGGAAGCAGCACGGGCTGGGATGCCTGTTGTGTGTGTTAGGCATGATGGTAGCGGTGGAGCAAATATCAAGGACATACATATGGAGAACTTCAATATCTCTGTTGGTGGTCGTGATCTTATTGTTGATGGTTCGGTTACACTTTCATTTGGAAGGCATTATGGTCTTGTTGGAAGAAATGGTACAGGCAAAACTACTTTCCTCAGACACATGGCTATGCATGCGATCGATGGTATTCCTATGAATTGTCAGATATTGCATGTGGAACAAGAGGTAACTGGTGATAATACATCTGCCTTGCAGTGTGTTCTCAATGCTGATATTGAGAGAACTCAACTTCTGGAGGAAGAATTCCAATTGTTAGCTAAACAGAGGGAATCTGAGGACAAAATCGAAAAGAGCAATGATAATTCGAATGGAGTGGTTGATAAAGATAATATTTCACAAAAGCTTGAGGGAATATACAAGAGGCTTGAGTTGATTGACGCTTATTCTGCAGAGTCACGTGCAGCAACGATACTTGCGGGTCTAAGTTTCACTCCTGAGATGCAGAAGAAAGCAACAAAAACGTTTTCTGGAGGGTGGCGGATGCGAATAGCTCTAGCTCGTGCATTGTTTATAGAGCCTGATATGTTGCTTCTTGACGAGCCAACGAACCATCTTGATCTGCATGCTGTCTTGTGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACTTTTATTGTTGTTTCTCATGCTAGGGAATTTTTAAACACGGTGGTTACTGATATAGTTCACCTACAAAACCAAAAGCTGACTACATATAAAGGGAATTATGATACTTTTGAGAGAACTCGAGCAGAACAAATTAAAAATCAGCAAAAAGCAATAGAGGCACATGAACGTTCAAGATCTCATATGCAGTCCTTCATCGACAAGTTCCGTTTTAATGCCAAGAGGGCGTCACTTGTTCAATCAAGAATCAAGGCTTTGGACAGAATGGGCCATGTAGACGAAATTGTTAATGACCCTGACTACAAATTTGAGTTCCCAACTCCAGATGATAGACCTGGTGCACCGATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGGCCCATTCTATTTAGGAACTTGAATTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCAAATGGTATTGGAAAATCAACTATACTTAAGTTAATTGCTGGGGAGCTGCAGCCCACTTCTGGGACAGTTTTCCGTTCTGCTAAGGTTCGTATAGCAGTGTTCAGTCAGCATCATGTTGATGGGCTTGACTTATCTTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTTACGGGAAATCTTGCTCTACAGCCAATGTATACTTTGTCAGGTGGTCAGAAAAGCAGGGTTGCATTTGCAAAGATTACTTTCAAGAAGCCACATATATTATTACTTGATGAGCCATCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTAATTCAAGGTCTTGTGCTGTACCAAGGAGGCATTCTCATGGTGAGTCACGACGAGCATCTTATATCTGGAAGTGTGGAGGATCTATGGGCTGTTTCCGATGGGAGAGTGACACCGTTCCATGGCAGCTTCCATGACTATAAGAGGATACTCCATTCATAG 2142 0.4351 MTEIASSVVHEVLGRRIIDVDQPIVDYIVNVLADEDFDFGLDGEGAFDAIGELLVAADCVDDFSESRSVCSKLSEKFGKHGLVKVKPAVRSLAVPFRMNEGLDDGEAPKKKPEPVDGPLLSERDKLKLERRKRKDERQREAQYQMHLAEMEAARAGMPVVCVRHDGSGGANIKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPMNCQILHVEQEVTGDNTSALQCVLNADIERTQLLEEEFQLLAKQRESEDKIEKSNDNSNGVVDKDNISQKLEGIYKRLELIDAYSAESRAATILAGLSFTPEMQKKATKTFSGGWRMRIALARALFIEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIVHLQNQKLTTYKGNYDTFERTRAEQIKNQQKAIEAHERSRSHMQSFIDKFRFNAKRASLVQSRIKALDRMGHVDEIVNDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFRNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLYQGGILMVSHDEHLISGSVEDLWAVSDGRVTPFHGSFHDYKRILHS 713
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1482 713 SMART AAA_5 529 696 IPR003593 -
Lal8g1482 713 SMART AAA_5 199 413 IPR003593 -
Lal8g1482 713 Gene3D - 127 449 IPR027417 -
Lal8g1482 713 Gene3D - 466 712 IPR027417 -
Lal8g1482 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Lal8g1482 713 Pfam ABC transporter 521 651 IPR003439 GO:0005524
Lal8g1482 713 Pfam ABC transporter 194 368 IPR003439 GO:0005524
Lal8g1482 713 CDD ABCF_EF-3 504 696 - -
Lal8g1482 713 MobiDBLite consensus disorder prediction 102 120 - -
Lal8g1482 713 ProSitePatterns ABC transporters family signature. 623 637 IPR017871 GO:0005524
Lal8g1482 713 PANTHER NON-TRANSPORTER ABC PROTEIN 121 711 - -
Lal8g1482 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 713 IPR003439 GO:0005524
Lal8g1482 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 121 711 - -
Lal8g1482 713 CDD ABCF_EF-3 175 413 - -
Lal8g1482 713 MobiDBLite consensus disorder prediction 100 120 - -
Lal8g1482 713 Pfam ABC transporter 407 487 IPR032781 -
Lal8g1482 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 436 IPR003439 GO:0005524
Lal8g1482 713 ProSitePatterns ABC transporters family signature. 340 354 IPR017871 GO:0005524
Lal8g1482 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 702 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal8g1482 Lal-Chr8 19079583 19087966 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1482 466 665 Calmodulin-binding Proteins AT2G36910 26.724 3.59e-11 65.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1482 K06158 - gmx:100790412 1259.97