Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1476 ATGTTGCTTAATGCAAATTTCAATAATTTCCCACACTCCAAATTACTCAATTCACAAACTCTCAAACCCAACACCTTCTTCACCTTCACATACCACAATGCTGCATCAATCAAAGAGAATCATCATTTAGGGTTTCATAACATTCTCGGAAAACGTGTATGCTATGTCTCCTCAATTTTACCCGGCCGGAGCTGGTGGACGTTGCCGGAGAACCGGGAAAATGACGCCGTATCAGCGGAGCCTACGGCGGTGATAGTTGCTGTCAGACAAATGTGGCATTTGGTTGCTGATCAGAAATTTGTTACCGTTGTAGCGATTGGCTCTCTTGTCGTTGCTGCTCTTTCAGAGATCTCCATACCGAGTATATTGGCAGCCTCAATATTTTCAGCACAAGGTGGTGAGGCCACGGTGTTCTCTAAGAATGCTCTGTTGTTGGTTCTTTTGTGTCTCACTTCTGGAATTTGCAGTGGGCTGCGAAGTGGCTGCTTTGGAATTTTGAACGTGACCTTGGTAAAGCGTCTACGTGAAAATTTATATACAGCCATTCTTTTTCAGGACATATCCTATTTTGATAAAGAAAAAGTTGGTAACTTGACAAGCAGGCTTGCAGCAGACTGTCAAAAATTATCCCATGTTATAGGAAACGATCTTCATTTGATATTACACAACACTTTGCGGGGAACAGGAGCAATGGTTAATTTGCTGGCATTATCTTGGCCTTTGGCATTATCTGCCTTGGTTATTTGCTTAATTTTATCTGCAATTTTCCTGGTTTATGGCCAGTATCAACGAGAAGCAACAAGGTTAACCCAAGATTTTGAAGCTTGTGCCAATGAAGCAGCTCAGGAATCACTTTCTTTGATAAGAATTGTTCGAGCTTATGGAACAGAAAAAAAAGAACTTGATAGATACAATCAGTGGCTGCAGAGATTAGCATTTATCAACAGTCGAGAGAGCGTGGCTAATGGATTTTGGAGTCTGAGTTTTAGCACCCTTTACCGTTCAACTCAGATATTTGCAGTGGTCTTAGGAGGGATGTCTGTTCTCAGTTGTTATATAACTACTGAGCAACTTACTAAGTATGTGTTATACTGTGAGTGGTTGATTTATGCCACTTGGAGGGTGACAAACAACTTATCATCATTAATGCAGTCTATTGGAGCATCTGAAAAGCTTTTCCAACTGATGTCTCTTTTGCCCAGTGACCAATTTTTAGCCAAAGGCAAGAGTGAAGTTGCAGAGGCTAATGGGGCAAATTCAATTTGTAAATGTATCATTTCATTATCCATCAAGGATTATGTCAACCCTGAGGCCTGCATGTGTTTGTGGCTAATTACGTACTACTTGTTTAATTTTCAATTGTTTCTGACATTTGAGCAGATGCCAGTTGTAGATCACTTAAACTTCTCTGTAGAACCAAATGAAGTTATCGCCATCGTTGGTCTTAGTGGTAGTGGAAAGAGCACATTACTCAATCTATTACTTCGTCTCTATGAGCCTAGTAGTGGCCAGATATCTATTGATGGATTTCCTCTTGAAGAATTGGATATCATGTGGCTGAGACAGAACATCGGATATGTTGCACAGGAACCCCATCTCTTTCACATGGACATCAAGTCAAACATAAAATACGGTTGTTCCATGGACAAAAAACAGGAAGATATTGAACGGGCAGCAAAACAGGCCTACGCCCATGACTTCATTTCTTCACTTCCTGATGGCTATGAAACCCTTGTGGATGACAATGTACTTAGTGGGGGACAAAAGCAACGGATTGCTATCGCCAGGGCCCTTCTTAGGGACCCGGTTATTTTGATACTTGATGAGCCAACTAGTGCTCTAGATTCTGAGAGTGAGCATTATGTCAAGGAGATCCTTTGTCCATTAAAAGATGAATCCAAATCAAGAACCATCATTATCTTAACACACAGGCTGTCTACTATTGAATCTGCTGACAGAATCTTCGCTATGGAAGGTGGTCGCATCATCGAGATGGGAAACCATGAAGAGCTTGTGCTGAAGGATGGGCTCTATGCAAAATTAAATAGATTTCAATCAGATATTTTGGCCTGA 2073 0.4115 MLLNANFNNFPHSKLLNSQTLKPNTFFTFTYHNAASIKENHHLGFHNILGKRVCYVSSILPGRSWWTLPENRENDAVSAEPTAVIVAVRQMWHLVADQKFVTVVAIGSLVVAALSEISIPSILAASIFSAQGGEATVFSKNALLLVLLCLTSGICSGLRSGCFGILNVTLVKRLRENLYTAILFQDISYFDKEKVGNLTSRLAADCQKLSHVIGNDLHLILHNTLRGTGAMVNLLALSWPLALSALVICLILSAIFLVYGQYQREATRLTQDFEACANEAAQESLSLIRIVRAYGTEKKELDRYNQWLQRLAFINSRESVANGFWSLSFSTLYRSTQIFAVVLGGMSVLSCYITTEQLTKYVLYCEWLIYATWRVTNNLSSLMQSIGASEKLFQLMSLLPSDQFLAKGKSEVAEANGANSICKCIISLSIKDYVNPEACMCLWLITYYLFNFQLFLTFEQMPVVDHLNFSVEPNEVIAIVGLSGSGKSTLLNLLLRLYEPSSGQISIDGFPLEELDIMWLRQNIGYVAQEPHLFHMDIKSNIKYGCSMDKKQEDIERAAKQAYAHDFISSLPDGYETLVDDNVLSGGQKQRIAIARALLRDPVILILDEPTSALDSESEHYVKEILCPLKDESKSRTIIILTHRLSTIESADRIFAMEGGRIIEMGNHEELVLKDGLYAKLNRFQSDILA 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1476 690 CDD ABC_6TM_TAP 105 391 - -
Lal8g1476 690 Gene3D ABC transporter type 1, transmembrane domain 83 402 IPR036640 GO:0005524|GO:0016021
Lal8g1476 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 684 IPR003439 GO:0005524
Lal8g1476 690 PANTHER ATP-BINDING ABC TRANSPORTER 41 688 - -
Lal8g1476 690 Pfam ABC transporter transmembrane region 106 364 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal8g1476 690 PANTHER ABC TRANSPORTER B FAMILY 41 688 - -
Lal8g1476 690 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 103 384 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal8g1476 690 ProSitePatterns ABC transporters family signature. 584 598 IPR017871 GO:0005524
Lal8g1476 690 Pfam ABC transporter 465 612 IPR003439 GO:0005524
Lal8g1476 690 SUPERFAMILY ABC transporter transmembrane region 89 400 IPR036640 GO:0005524|GO:0016021
Lal8g1476 690 SMART AAA_5 473 669 IPR003593 -
Lal8g1476 690 Gene3D - 460 685 IPR027417 -
Lal8g1476 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 459 685 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1476 Lal-Chr8 18985312 18997015 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1476 173 685 Calmodulin-binding Proteins AT2G36910 33.021 4.60e-60 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1476 - - aprc:113857420 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1476 8 18985312 18997015 Lal8g1476 8 18985312 18997015 ECH