Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1475 ATGGAGTCACTAGTTGATAGAGTTGAGTCTATATCAGAGGTTCAGAATTCGGTTTCCGGGGTCGATCACTATCCTCCTTCCACATCTGGGATTAAGCCAATCGTCTACCATCAAAGCAGCTATGTAGTTAATGGCACATCTGACTTTGTGAGCCTCAATAAAACTGTTCAAAGTTGTTTACGGCAGAACATCTCCGCAATGGAAACGAAATTGCGCATCGATAAACCGTTTGAAGATTCCAACAATTGTGAAATAGAGTCTGACAATGGCATATTAGGTTCATCAAAAGGAGACGTTGATCATAAAAAAAGTCGGTATCAGTCAGAAACTACTTCTAGTCCAAGTCCTCCGAATAGTTTATGTTCTGCCACTGTTTATTCAGAAGCCAAACAAAGTTTCGCCAATACTGTAGCCAGTGAATGTGTTAGTAGTGTCGATAAGTCGGTTGAAAGTGGAGAAGTTACTAATTCCGGTTTCTTCAATGAGAGCAGGAAGAGCAGCATTTGTAGAGGGAGTACCGGAAGTGATGTTAGTGATGAGAGCAGCACAAGTAGTTTGAGCAATGCTATGTATAAACCTCACAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCCATCCGAGTTCGTGACGGGATGTTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCGGAGTTAAACGGCACAAGGACTTGTTTCGCTATGAAAGTAATGAACAAAACTGAGCTGGCTAGTCGGAAGAAGCTCGTGAGAGCTCAAACTGAGAGAGAGATATTGCAATCTCTAGATCATCCGTTTCTACCGACATTATATACATATTTTGAGACAGACACATTCTCATGCTTGGTTATGGAGGTTTGTCCTGGTGGGGATTTGCATGCACTCAGGCAAAGACAACCCGGAAAGTATTTTTCTGAACATGCTGCAAGGTTTTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGCATCATCTATAGAGACCTTAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATCATGTTGTCGGATTTCGATCTCTCTCTAAGGTGTGTTGTTAGTCCAACTATGGTAAAGTCGTCACATGCTTTCATGGAGACAAAGAACTCTGGAGGATACTGCGCTCAGCCTGCTTGCATTGCACCGACTTGTGTAATCCAGCCAGACTGCATCCAACCTTCATGTTTCATGCCGCGTTTTCTAGCAAACAAATCCAAGAAGAAAGAAAAAAAGTCGAAACCAAAGAATGATATGCATAATCAAGTGATTCCTCTCCCTGAGCTTCTTGCCGAGCCTACAAATGCGCGATCAATGTCCTTCGTAGGTACACACGAGTACTTGGCACCCGAGATAATCAAAGGTGAAGGCCATGGCAGTGCTGTAGATTGGTGGACATTTGGTATATTCTTATACGAGCTTTTATTTGGTCGAACGCCTTTCAAAGGTTCAGCGAATAGAGCGACTCTATTTAATGTAGTTGGCCAGCCCTTGAGATTTCCGGAATCTCCTACAGTCAGTTATGCTGCAAGGGACTTGATAAGAGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTCGCCTATAGACGTGGCGCTACAGAGATAAAACAACATCCATTCTTTCAAAATGTTAACTGGGCGCTTATCCGATGTGCGAATCCCCCAGAGGTTCCGCAACAAGACATTAAAGCATCAGCACTCATAGCTGAAAAGGTTCCTGCTGTGAACCCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1815 0.4275 MESLVDRVESISEVQNSVSGVDHYPPSTSGIKPIVYHQSSYVVNGTSDFVSLNKTVQSCLRQNISAMETKLRIDKPFEDSNNCEIESDNGILGSSKGDVDHKKSRYQSETTSSPSPPNSLCSATVYSEAKQSFANTVASECVSSVDKSVESGEVTNSGFFNESRKSSICRGSTGSDVSDESSTSSLSNAMYKPHKANDIRWEAIQAIRVRDGMLEMRHFRLLKKLGCGDIGSVYLAELNGTRTCFAMKVMNKTELASRKKLVRAQTEREILQSLDHPFLPTLYTYFETDTFSCLVMEVCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTMVKSSHAFMETKNSGGYCAQPACIAPTCVIQPDCIQPSCFMPRFLANKSKKKEKKSKPKNDMHNQVIPLPELLAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSYAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPQQDIKASALIAEKVPAVNPSGNYLDIDFF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1475 604 CDD STKc_phototropin_like 217 578 - -
Lal8g1475 604 MobiDBLite consensus disorder prediction 84 120 - -
Lal8g1475 604 Gene3D Transferase(Phosphotransferase) domain 1 452 576 - -
Lal8g1475 604 Gene3D Transferase(Phosphotransferase) domain 1 303 403 - -
Lal8g1475 604 SUPERFAMILY Protein kinase-like (PK-like) 195 577 IPR011009 -
Lal8g1475 604 SMART serkin_6 219 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1475 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Lal8g1475 604 Pfam Protein kinase domain 220 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1475 604 Pfam Protein kinase domain 455 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1475 604 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 61 604 - -
Lal8g1475 604 ProSiteProfiles Protein kinase domain profile. 219 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1475 604 Gene3D Phosphorylase Kinase; domain 1 218 302 - -
Lal8g1475 604 PANTHER FLIPPASE KINASE 1-RELATED 61 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1475 Lal-Chr8 18976481 18979744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1475 126 604 AGC Kinase Gene Family AT5G47750 70.183 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal8g1475 Pkinase 3.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1475 K08286 - gmx:100802402 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1475 8 18976481 18979744 Lal8g1475 8 18976481 18979744 ECH