Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1474 ATGGATTTCACCCCAAATTCTGATTCCACTTCTCGTCTCGGAATCGATCTCAATGAGATTCCTCCGCCTGATTTAACTGTCTCTGATTTGTGCCCTACCCATGATTTCACAAAGCAAACTGTGGCCGATAGTTCTTTTGATGCCAATCCATTTGGTGCCCCAATTGCATATTCAAACTTGCACAACATGAGTGCTTCTGAGGATACGATTGATCACACTCAATCATTGATTAAAAGCTTTGAGAAGAGTCTTAGAGATTTTATATCTGAATGGCGTGATGAGCTGAAGGATGGTTGGTATGTGGAACTCAGGCAATCAGTGAGCAGTTCTGAAGTGTATGCAGTTTACTGTGCACCAGATGGAAATGCATTTTATTCTTTGCATGATGTAGCTTGTTATCTGGGGAAAATGTCTGGTCACAATTCTAAGGGATCGGAAATAAGAAATGAGGAGTCGGGTGGGCCTCAAACATCCAGAAAAAGGAAATCCCCAATCTCTCCAGTAGCCAATGGTTTTGCAGAAAAGCATGGAACCTTGATCAATAGTTATTGCAAGGATTCTCCTTCTGATGGCTTAATTCCTCCTTCTGATGGGTTAAGTATCAAAGGTGATCATGTTGTTGGTAATATCCCAAAAGCTAGTGAAGCTGAAATTATAAGAAAAGAGGATGCTCACTCCGGTCCTGAGAAATCTGCTTTGGTTGCAGAGGTGCCTGATGCAAAAGACTCTTCTGAAAACCATTTGTGTGGTGATGGCAGTATTCCTGATTGGGCACTGGAACTAGAACCTGTCAGAAAACTGCCAACAAATGTTGGAACCCGTATCAGAAAATGTGTATATAATGCTTTGGATAAGAATCCACCGGAATGGGCTAAGAAAACTCTGTTGCGTTCCATCAGTAAGGAAGTTTTCAAGGGCAATGCATCTGGACCCACAAAGAAAGCAGTTCTTTCAGTTTTGGCTACTGTAACTGGTGAAGGAACCCAACAAAAGCCCCCAAATAGAAGAAGGAAATAG 1017 0.4199 MDFTPNSDSTSRLGIDLNEIPPPDLTVSDLCPTHDFTKQTVADSSFDANPFGAPIAYSNLHNMSASEDTIDHTQSLIKSFEKSLRDFISEWRDELKDGWYVELRQSVSSSEVYAVYCAPDGNAFYSLHDVACYLGKMSGHNSKGSEIRNEESGGPQTSRKRKSPISPVANGFAEKHGTLINSYCKDSPSDGLIPPSDGLSIKGDHVVGNIPKASEAEIIRKEDAHSGPEKSALVAEVPDAKDSSENHLCGDGSIPDWALELEPVRKLPTNVGTRIRKCVYNALDKNPPEWAKKTLLRSISKEVFKGNASGPTKKAVLSVLATVTGEGTQQKPPNRRRK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1474 338 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 236 338 - -
Lal8g1474 338 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 14 194 - -
Lal8g1474 338 MobiDBLite consensus disorder prediction 143 157 - -
Lal8g1474 338 SUPERFAMILY DNA-binding domain 88 145 IPR016177 GO:0003677
Lal8g1474 338 Pfam Methyl-CpG binding domain 87 138 IPR001739 GO:0003677
Lal8g1474 338 PANTHER OS02G0192300 PROTEIN 236 338 - -
Lal8g1474 338 PANTHER OS02G0192300 PROTEIN 14 194 - -
Lal8g1474 338 MobiDBLite consensus disorder prediction 141 168 - -
Lal8g1474 338 Gene3D - 64 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1474 Lal-Chr8 18969356 18972551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1474 216 331 C2H2 Transcription Factor Family AT3G01460 58.475 7.31e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1474 K22768 - lang:109358435 472.626