Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1473 ATGGATTTCACCGCCAATTCTCTCCTCCGTATTGACCTCAATCAGATCCCTCCGCCCGATCACTCCACCGCCGCAACTACCACCACCACCACCCCTCACCTCTGCGCCGTGTGCGGCACCACTCAAGTCCACTCACTCGTTGGTCATGAATGGCTTTGTCGTCAATGTCTGGATGATAGAGTTAACACTGAACTTTGTCATACCCATGATTTCAGAAAGCAAACTGTGGCCGGTAATTCTTTTGGTGTCAATCCATTTGGTGCCGCCTCAATTGCATATTCAAACTTGCACAACAGGAGTGCTTTTGAGGACACGATTAATTACACCCGATCATTGATTAAAAGCTTTGAGAAGAGTCTTAGAGATTTTATATCTGAATGGCGTGATGAGCTGAAGGATGGTTGGTATGTGGAACTTAGGCAATCAGTGAGTAGTTTTGAAGTGTATGCAGTTTACTGTGCACCGGATGGAAAAACATTTTATTCTTTGCATGAAGTAGCTTGTCATCTGCGGCAAATGTCTGGTCACAATTCTATGGAATCCGAAATAAGAAACGAGGAGTCAGGTGAGCCTCAAACATCCAGAAAAAGAAAAGCCCCAAAAGCTCCAGTAGCCAATGGTTTTTCCGAAAAGGGTGGAACCATGATCAATAGTCATTGCAAGGATTCTCCTTCTGCTGGGATAAGTCCTCCTTCTGACGGGTTAAGTCCTCCTTCTGACGAGTCAAGTGTCAAATGTGCTCCTGTTGTTGGTAATATCCGAAAAGCTAATGAAGCTGAAATTAGAAGAAAAGAGGATGGCCACTCCAGTCCTGAGCAACCTGCTTTGCTCGCAGACGTGTCTGATGCGAAGGACTCTTCTGAAAACATTTCGGGCGGTGATGTCAGTATTCCGGAATGGGTAATGGAACTAGAACCTGCCAGAAAACTACCAACAAATGTTGGAACCCGTATCAGAAGATGTATATATAATGCTTTGGATAAGAATCCGCCAGAATGGGCTAAGAAAGTTCTGTTGCATTCCATAAGCAAGGAAGTGTTCAAGGGCAATGCATCTGGACCCACAAAGAAAGCAGTTCTTTCAGTTTTGGCTAAAGTATCTGATGAATTAATGCGACAAAAGCCACCCGACAAAAGAAGGAAATAG 1146 0.445 MDFTANSLLRIDLNQIPPPDHSTAATTTTTTPHLCAVCGTTQVHSLVGHEWLCRQCLDDRVNTELCHTHDFRKQTVAGNSFGVNPFGAASIAYSNLHNRSAFEDTINYTRSLIKSFEKSLRDFISEWRDELKDGWYVELRQSVSSFEVYAVYCAPDGKTFYSLHEVACHLRQMSGHNSMESEIRNEESGEPQTSRKRKAPKAPVANGFSEKGGTMINSHCKDSPSAGISPPSDGLSPPSDESSVKCAPVVGNIRKANEAEIRRKEDGHSSPEQPALLADVSDAKDSSENISGGDVSIPEWVMELEPARKLPTNVGTRIRRCIYNALDKNPPEWAKKVLLHSISKEVFKGNASGPTKKAVLSVLAKVSDELMRQKPPDKRRK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1473 381 MobiDBLite consensus disorder prediction 180 197 - -
Lal8g1473 381 Gene3D - 110 212 - -
Lal8g1473 381 MobiDBLite consensus disorder prediction 211 239 - -
Lal8g1473 381 SUPERFAMILY DNA-binding domain 125 200 IPR016177 GO:0003677
Lal8g1473 381 Pfam Methyl-CpG binding domain 123 174 IPR001739 GO:0003677
Lal8g1473 381 MobiDBLite consensus disorder prediction 176 249 - -
Lal8g1473 381 PANTHER OS02G0192300 PROTEIN 279 380 - -
Lal8g1473 381 PANTHER OS02G0192300 PROTEIN 7 229 - -
Lal8g1473 381 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 279 380 - -
Lal8g1473 381 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 7 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1473 Lal-Chr8 18962437 18965853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1473 259 380 C2H2 Transcription Factor Family AT3G01460 55.906 1.06e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1473 K22768 - lang:109358435 619.772