Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1469 ATGCCACTCACACGGTTTCCGAAGCAAAACATCCGAACCAACAGGCTCGGTTTCTCTTCCGTCAACGATGGCCCCACACGAAGCAATATATTCCGTACCACGAACCATAGGAGCTGGATTATTGACATAGGAGGATTTGCAAAGAAAGTGAAAAGCACTACTTTGTCATCAGCTGAACAAATCAAAGACTGTGGAGCATATCGGGAATGCCCGAATTGTCGCTATCGTATTGATAACAGCGATGTTTCTACTGAGTGGCCTGGTTTTCCTCTTGGTGTGAAATTTGATCCTTCTGATGTAGAGCTCGTAGAACATTTAGCAGCAAAATGCGGCATTGGGAACACCGAGCCGCACATATTTATTAACGAGTTCATCCCAACCCTTGAAGGAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTTCTAAGAAAGATGGGAGAACTGTGCATTTCTTTCACAGAACTACCAATGCATACTCTACTGGTCAGCGAAAGCGTCGAAAAATTCATCATGAAAATGGTTTGACCGAGGAGCACGTGCGCTGGCATAAGACTGGTAAAACTAAAGCTGTAGTAGAGAATGGAGTACACAAGGGTTTCAAGAAAATAATGGTTCTTTATATAAGGCCTGAAAAAGGGTCGAAGCCCTACAAATCCAATTGGGTGATGCACCAGTACCATCTAGGGGCTGAAGAAGATGAGAAGGATGGTGAATATGTGGTTTCAAAAATATTTTACCAACAGCAAAAGCAGACTGATAAAAATGAGGAGAATCCAATGGCCGAAGATTCTATTGTGCCATCGCGAACAAGTCCAAGGACTCCAAAGCCAAATCCCCCCTATCCACCTCGAAAAGGAAAATGTATTGACTGTGATGATCATATTGATGAAGCACAGGATGCCAAGCCTGTCGTAGAATCTTATGCCGCGCTATCTGATGGTCTGGATCAGGACTATGCAGGTGAGCCTGCATGGTTGGCTGGTGAGTCACAGGCTGTGGAAAATGATGAATTTGATGGCTTGGATGATATATTAATATGCAAGGAAATCTTAGATTCTTCTGCTCTATTAAATGATTCTGGATTCAACTCCACCACTCTCAATACCTTTGTTAGCAATGCTAATGAAATGACTGCAAATGGCGAAGTATCTTATGGAATTTCTGTCCTGGATACCCTGGATTTGGATACTCCTCCAGATTTTGATCTTTCTAATTTAACCTTTTGTTCTCAAGACAGTATCCTTGATTGGATGGACAGGCTATGA 1275 0.4275 MPLTRFPKQNIRTNRLGFSSVNDGPTRSNIFRTTNHRSWIIDIGGFAKKVKSTTLSSAEQIKDCGAYRECPNCRYRIDNSDVSTEWPGFPLGVKFDPSDVELVEHLAAKCGIGNTEPHIFINEFIPTLEGDQGICYTHPENLPGSKKDGRTVHFFHRTTNAYSTGQRKRRKIHHENGLTEEHVRWHKTGKTKAVVENGVHKGFKKIMVLYIRPEKGSKPYKSNWVMHQYHLGAEEDEKDGEYVVSKIFYQQQKQTDKNEENPMAEDSIVPSRTSPRTPKPNPPYPPRKGKCIDCDDHIDEAQDAKPVVESYAALSDGLDQDYAGEPAWLAGESQAVENDEFDGLDDILICKEILDSSALLNDSGFNSTTLNTFVSNANEMTANGEVSYGISVLDTLDLDTPPDFDLSNLTFCSQDSILDWMDRL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1469 424 ProSiteProfiles NAC domain profile. 89 250 IPR003441 GO:0003677|GO:0006355
Lal8g1469 424 MobiDBLite consensus disorder prediction 252 288 - -
Lal8g1469 424 Pfam No apical meristem (NAM) protein 90 231 IPR003441 GO:0003677|GO:0006355
Lal8g1469 424 Gene3D NAC domain 98 255 IPR036093 GO:0003677|GO:0006355
Lal8g1469 424 SUPERFAMILY NAC domain 74 250 IPR036093 GO:0003677|GO:0006355
Lal8g1469 424 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 36 422 IPR044799 GO:0003700
Lal8g1469 424 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 36 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1469 Lal-Chr8 18877349 18881843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1469 70 252 NAC Transcription Factor Family AT1G28470 54.255 1.97e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal8g1469 NAM 4.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1469 - - gmx:100794879 599.742