Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1463 ATGAAGAGAAGAACCAAAAAACAAAGCAAAGATTTTTCTTCTTCTTCTTCTTCATCTTCATCTCTTAAACCACTTGGAAGAAAAAACAGATCAAAAACAAGAAAACCAAAGTTTCTTAGTCTTCGTCTTCAACTATCTCAACCCAACAAAACAACAATGATTCAACAACAACAACAAAAACAACCACAGTTGAATCTTTTTCCACTACACCCAGAAAACACAGTGGTTGATGAAAAACTAGACATGCATGAAGAAACCAACGACGTAGCTTTATTCTTCAGTTCAGATTGCAGTGCAACCCTTAATGGGTTACTCGAAGATGAATCAACTGTAACAAAGAACACAACTTCGTCGGAGGAAGAAGAAGGGTCTCTCTCAGCATTCGACGGTGGTGGTTGTGGTGGTGGTGGTGGTGGAGGAGAGAGTGGGAGTTGGCTAGTGAGGAAGGCGATGAGGAGGTGGAATAAAGAAGATGATGGGTGTGAAGAAAGGTGGGTGTGTTACTCGGAGGTGACTAGCGCCACCGTGACAGCCACCGTGAAGGATAATGAAACGGTGGTGGGTGTTGTTAATAAGGAGGATGTGTTGTATGGAACGACGTCGTTTGGGGTATTGTCATTGAAGTTGGATCATGAAGGGATAATGAATGCATGGTCTGATAAAGGGTCACTTTATGTTGAAGGACAGGTCCCACAAACTGTACCTAATTTTCATCATCATCATCTTCACAATCCCAATGTTCCATGGGATGGTTGGGGCAGTGATGTTGGGAACACATGGACTGTTCCGGAAAGTTGTGGGGCTAACAAGATGAAGGTGAAAGAAGAAATGGGTTCGAAACTCGGGCAAAGAGAGGCAAGTGTGTTAAGATACAAAGAGAAGAGGCAAAGCAGACTCTTTTCGAAGAAGATCCGCTACGAAGTTCGCAAGCTCAATGCTGAGAAGAGGCCTAGGATGAAGGGAAGATTCGTCAAGAGAGGATGA 984 0.4339 MKRRTKKQSKDFSSSSSSSSSLKPLGRKNRSKTRKPKFLSLRLQLSQPNKTTMIQQQQQKQPQLNLFPLHPENTVVDEKLDMHEETNDVALFFSSDCSATLNGLLEDESTVTKNTTSSEEEEGSLSAFDGGGCGGGGGGGESGSWLVRKAMRRWNKEDDGCEERWVCYSEVTSATVTATVKDNETVVGVVNKEDVLYGTTSFGVLSLKLDHEGIMNAWSDKGSLYVEGQVPQTVPNFHHHHLHNPNVPWDGWGSDVGNTWTVPESCGANKMKVKEEMGSKLGQREASVLRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKGRFVKRG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1463 327 MobiDBLite consensus disorder prediction 109 123 - -
Lal8g1463 327 Pfam CCT motif 284 326 IPR010402 GO:0005515
Lal8g1463 327 PANTHER CCT MOTIF FAMILY PROTEIN 18 326 - -
Lal8g1463 327 MobiDBLite consensus disorder prediction 11 26 - -
Lal8g1463 327 MobiDBLite consensus disorder prediction 1 38 - -
Lal8g1463 327 ProSiteProfiles CCT domain profile. 284 326 IPR010402 GO:0005515
Lal8g1463 327 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 18 326 - -
Lal8g1463 327 MobiDBLite consensus disorder prediction 109 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1463 Lal-Chr8 18810411 18815084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1463 205 326 C2C2-CO-like Transcription Factor Family AT1G73870 45.082 4.09e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal8g1463 CCT 1.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1463 - - adu:107494886 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1463 8 18810411 18815084 Lal8g1463 8 18810411 18815084 ECH