Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1451 ATGTTCTTCGGTGATTCCTTAATTTCAAAGAGGAGAAAGGTCACCAATTTTTATTCAATGGATTCTCAATCTTTTAAGACCAAGCTTGCAGATTTGAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGTACTTTCTCCATCTTCAAATGCTGCTTCATCCAATGGAGAGGAGACTGATGAATTCTATGAGTTCACTTCTGAAGATTATTACCGAATTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAACTCCGAGAAGCAGATGAGAAATTGCGTAGGTCGAGAATAACAAAAGCTGTCATTAGAGTTCGCTTTCCCGATAATAACACATTGGAGGCTACCTTTCACCCATCAGAAACAATCCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAGTCAGAGCAGCCATATTATATATATACTACTCCGCCTAAGAAGATCGTCAACGATTTGTCTCAGGATTTTTATACTGCTGGCTTTTGTCCTGGTGCAATTGTGTACTTTTCATACAATGTTCCAAAAGGTGATAGCGCTGTGGTTGACCATATCGGCCCTTACCTACGCGACGAGATCTTGTCTTTGAAGGGTTTGGATGTTTCTAATGATCAAGGCCAGCAATCCGAGCCAGAGCAGCCTGTGCCAGAGGCAGCCGAGGCAACGCAGCGCCCTCCTATTGAAGAACAACGTAAACCTGCCGAGAAAAAACTTGTTAAACCAAAGTGGCTAAAAATGTGA 762 0.4081 MFFGDSLISKRRKVTNFYSMDSQSFKTKLADLKERFGREIHVFETSVLSPSSNAASSNGEETDEFYEFTSEDYYRILATKKEDKFLKTRKLREADEKLRRSRITKAVIRVRFPDNNTLEATFHPSETIQSLIDLLNKVIAQSEQPYYIYTTPPKKIVNDLSQDFYTAGFCPGAIVYFSYNVPKGDSAVVDHIGPYLRDEILSLKGLDVSNDQGQQSEPEQPVPEAAEATQRPPIEEQRKPAEKKLVKPKWLKM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1451 253 CDD UBX2_UBXN9 106 179 - -
Lal8g1451 253 ProSiteProfiles UBX domain profile. 101 177 IPR001012 GO:0005515
Lal8g1451 253 MobiDBLite consensus disorder prediction 209 253 - -
Lal8g1451 253 MobiDBLite consensus disorder prediction 231 253 - -
Lal8g1451 253 Gene3D - 95 178 - -
Lal8g1451 253 Pfam UBX domain 104 172 IPR001012 GO:0005515
Lal8g1451 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 9 253 - -
Lal8g1451 253 SUPERFAMILY Ubiquitin-like 81 177 IPR029071 -
Lal8g1451 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 9 253 IPR044232 GO:0032984|GO:0051117
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1451 34 134 C2H2 Transcription Factor Family AT2G01650 34.286 8.23e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1451 K15627 - gmx:100818386 357.066