Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1449 ATGACGGTGTTCTCCGCCAAGCAAGTCTTCCCGGTGGACTACGAGCCTCACGTCTCTCAGCTCCTTCTACAAGCTTCTCACTCCGGCGATCTCACCTCCGTCTTCCACTGCATTTCCGATCCCTCCGTCGACGTCAACTTTTCCGGCGCCGTCACGTTGAAAACTAGGAACACCGATCTCATTCTCTTTCATGAATCTGCTACACAAGTTTGTGTTCAGTTTCACGAATTCGTCACTGACGTCACGCCTTTGTTCCTTGCGGTTCATGCTGGAAACGCTAGCCTTGTTAGGAAGTTACTGAGTATTGGAGCTGATGTAAACCAAAAGCTCTTTAGAGGCTTTGCAACAACTGTGGCAGTGAGGGAAGGCCACCTTAATATTCTTGAGATCTTACTTAAAGCAGGAGCATCACAGCCAGCATGTGAGGAAGCTCTTTTGGAGGCAAGCTGCCATGGACAAGCAGGGTGTGCAGAACTACTCATGAGCTCTGATTTGATCCGACCTCATATCACAGTACATGCTCTCATGACCGCATGCTGTAGGGGGTTTGTAGATGTGATTGAGACACTCATAAAGGTACTTGTTCTGCAGCAGCACAGTTCTAGGGATTTCTTGAAGTGTGGTGTTGATGCAAATGCGACAGACCGTGTACTTTTACAGTCACTTAAGCCGTCTCTCCACACAAACGTGAATTGTACTCCTCTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTTGATTTGCTACTGCAGAGTGGTGCTAGGATAGACTCTGAAGTGAGGCTTGGAGCCTGGTCGTGGGACATTTCAACTGGTGAAGAGCTTCGTGTGGGTGCTGGGTTGGGAGAACCTTATGGCATCACCTGGTGTGCAGTTGAGTACTTTGAAAGAAGTGGTGCTATACTGCGATTGCTTTTGCAACATGTATCCTCCAATAGTCCTCACTGTGGAAGAACCCTTCTACACCATGCCATCCTCTGTGGCAATGTCGAGGCTGTCAGGACACTCTTAGAATGTGGCGCTGATCCAGAATCCCCGGTCAAAACAACCAACAAGACCGAGTTCCTTCCTGTACACATGGCATCTCGTCTTGGCTTACCATTAATTATTCAATGCCTTATTGATTTTGGTTGTGAGTTGAACTCTATAACAAACTCCGGTGACACTTCTGTGATGATCTGTGCCAAATATAAACAGGAGGAGTGCCTCAAAGTACTAACAATGGCTGGTGCTGATTTTGGTTTGGTGAATATTGCTCGTCAATCTGCAAGTTCAATTGCAGAGTCAAATAAGTGGACACTTGGTTTTCAGCAAGCAGTGCTGGATACAATTAGAGAAGGCAAGGTACCAAAGTCCAGCAATACTTCTGCATTTCCCCCCTTAATGTTCGTAGCTCAGGCTGGAGATACGGAAGCATTGAAAACAATGATTGAATCTGCAGAATTTGATCTTGACTACCAAGATGATAGTGGTTTCTCTGCAGTTATGCTTACTGCTTTAAAGGGTCACGTGGAATCATTTCGATTGCTTGTATATGCTGGAGCCGATGTAAATCTGTGCAATAAATCTGGTGAAACAGCAGTTACCCTATCTGAGTTAAATCAAAACTCTGATATGTTTGAAAAGGCCATGCTTGAGTTTGCACTTGAAAAGGACAATCGCAACGCGAGTGGCTTCTATGCTTTACATTGTGCAGCTCGCCGTGGTGACTTAGATGCTGTTAAATTGCTCACTAGCAAAGGTTATGATGTGAATGTCCCTGATGGGGAAGGCTACACTCCACTCATCTTAGCAGCAAGGGAAGGCCATGGTTCCATTTGTGAGCATCTAATTTCATATGGTGCTAATTGCAATGCTAAAAATGCTAGAGGGGAAACTGCACTTTTACTTGCAAGGAAATTGGCAGCCGGAAACAACAATGCAGAAGCTGCTATCCTGGATGAACTTGCTCGTAAATTGGTACTTCGCGGTGCCTATGTTCAGAAGCACACCAAAGGCGGGAAGGGCGTTCCACACAAGAAACAAATAAGGATGTTGGACCCTTCAGGTGTGCTGTGTTGGGGAAAGTCAAGCCAGAGAAATGTGATGTGTTGTGAGGCAGAGTTAGGACCAAGCTCAACATTACGTAGAAATAGGTACAAGAAAGGCGATGCCGATGAACCTGGAATGTTTAGAGTGCTTACTAACAAGAACAAGGAAGTGCATTTCGTATGCGATGGCGGATTAGAAGTTGCCGAGCTTTGGGTGAGAGGTATAAAACTTGTAACCAAAAACTCTATTTTTGGGAAGCAGAGAATCAATGTGAGTAAGCATTAG 2319 0.4558 MTVFSAKQVFPVDYEPHVSQLLLQASHSGDLTSVFHCISDPSVDVNFSGAVTLKTRNTDLILFHESATQVCVQFHEFVTDVTPLFLAVHAGNASLVRKLLSIGADVNQKLFRGFATTVAVREGHLNILEILLKAGASQPACEEALLEASCHGQAGCAELLMSSDLIRPHITVHALMTACCRGFVDVIETLIKVLVLQQHSSRDFLKCGVDANATDRVLLQSLKPSLHTNVNCTPLVAAVIHRQVPVVDLLLQSGARIDSEVRLGAWSWDISTGEELRVGAGLGEPYGITWCAVEYFERSGAILRLLLQHVSSNSPHCGRTLLHHAILCGNVEAVRTLLECGADPESPVKTTNKTEFLPVHMASRLGLPLIIQCLIDFGCELNSITNSGDTSVMICAKYKQEECLKVLTMAGADFGLVNIARQSASSIAESNKWTLGFQQAVLDTIREGKVPKSSNTSAFPPLMFVAQAGDTEALKTMIESAEFDLDYQDDSGFSAVMLTALKGHVESFRLLVYAGADVNLCNKSGETAVTLSELNQNSDMFEKAMLEFALEKDNRNASGFYALHCAARRGDLDAVKLLTSKGYDVNVPDGEGYTPLILAAREGHGSICEHLISYGANCNAKNARGETALLLARKLAAGNNNAEAAILDELARKLVLRGAYVQKHTKGGKGVPHKKQIRMLDPSGVLCWGKSSQRNVMCCEAELGPSSTLRRNRYKKGDADEPGMFRVLTNKNKEVHFVCDGGLEVAELWVRGIKLVTKNSIFGKQRINVSKH 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1449 772 SMART ANK_2a 387 416 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 112 140 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 170 200 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 354 383 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 230 259 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 457 487 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 558 587 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 79 108 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 317 346 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 491 520 IPR002110 GO:0005515
Lal8g1449 772 SMART ANK_2a 591 620 IPR002110 GO:0005515
Lal8g1449 772 Gene3D - 545 653 IPR036770 -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 230 262 IPR002110 GO:0005515
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 317 349 IPR002110 GO:0005515
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Lal8g1449 772 Gene3D - 168 272 IPR036770 -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat region circular profile. 558 589 - -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Lal8g1449 772 PANTHER ANKYRIN REPEAT-CONTAINING 5 764 - -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat region circular profile. 491 523 - -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 558 590 IPR002110 GO:0005515
Lal8g1449 772 ProSiteProfiles Ankyrin repeat region circular profile. 591 622 - -
Lal8g1449 772 Gene3D - 438 544 IPR036770 -
Lal8g1449 772 SUPERFAMILY Ankyrin repeat 81 430 IPR036770 -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat region circular profile. 79 107 - -
Lal8g1449 772 PANTHER ANKYRIN DOMAIN PROTEIN 5 764 - -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat region circular profile. 317 343 - -
Lal8g1449 772 Pfam Ankyrin repeats (3 copies) 295 345 IPR002110 GO:0005515
Lal8g1449 772 Pfam Ankyrin repeats (3 copies) 545 622 IPR002110 GO:0005515
Lal8g1449 772 Pfam Ankyrin repeats (3 copies) 84 163 IPR002110 GO:0005515
Lal8g1449 772 Gene3D - 13 167 IPR036770 -
Lal8g1449 772 ProSiteProfiles Ankyrin repeat profile. 491 523 IPR002110 GO:0005515
Lal8g1449 772 SUPERFAMILY Ankyrin repeat 316 633 IPR036770 -
Lal8g1449 772 Gene3D - 288 437 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1449 Lal-Chr8 18669315 18674696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1449 462 673 Ion Channels AT2G25600 28.302 8.05e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1449 - - gmx:100809132 1224.92