Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1443 ATGAAAGTGTGGACTGATATGGCTGGAAGTGTTATTCAGCAGTTATTGAGGAGGAAACTTCAGTCTCAATCTACTAGTACTTCCTTTTTGTCATCCATCATTGCAAAGAAAGATGATGCTGGTTCTACCGGCAGCAGGTCCTTAAGAGCACTTGCGTTAATTGGTGCCAGTGTATCAGGATTTCTGAGCTTTGCAACAACTGCATCAGCTGATGAAGCTGAACATGGCCTTGCTTCTCCAAACTATCCATGGCCTCATGAAGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGCCATTCTATGGGTTTGATCTCATACCGTGATTTGGTTGGTGTTGCCTATACCGAAGAGGAGGTTAAGGCTATGGCAGCCGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGCGATCGTTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCATATCCTCCAGATCTAAGCCTTATTACCAAAGCCCGTCACAATGGTCAGAACTATGTATTTGCCCTTCTGACTGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTTCATTATAATCCTTATTTCCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTTGAGTATGAAGATGGTACCCCTGCGACCGAAGCTCAGATGGGGAAAGATGTTGTGTCGTTCTTAACTTGGGCCGCGGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATTTTTGTACTGTCACTGGCACTACTTCAAGCTGCATATTACCGTCGCCTGAGATGGTCAGTTCTAAAATCGCGTAAGCTGGTTCTCGATGTTGTTAACTAG 942 0.4522 MKVWTDMAGSVIQQLLRRKLQSQSTSTSFLSSIIAKKDDAGSTGSRSLRALALIGASVSGFLSFATTASADEAEHGLASPNYPWPHEGILSSYDHASIRRGHQVYTQVCASCHSMGLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1443 313 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 17 313 - -
Lal8g1443 313 PANTHER CYTOCHROME C1 17 313 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 ProSiteProfiles Cytochrome c family profile. 96 203 IPR009056 GO:0009055|GO:0020037
Lal8g1443 313 Gene3D - 73 268 IPR036909 GO:0009055|GO:0020037
Lal8g1443 313 Gene3D - 269 312 - -
Lal8g1443 313 Pfam Cytochrome C1 family 84 300 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 82 101 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 102 121 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 147 167 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 180 204 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 218 229 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 229 248 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 249 268 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 PRINTS Cytochrome C1 signature 268 283 IPR002326 GO:0009055|GO:0020037
Lal8g1443 313 SUPERFAMILY Cytochrome c 77 267 IPR036909 GO:0009055|GO:0020037
Lal8g1443 313 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 268 312 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1443 Lal-Chr8 18622805 18629036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1443 7 313 Chloroplast and Mitochondria Gene Families AT3G27240 86.408 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1443 K00413 - gmx:100789781 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1443 8 18622805 18629036 Lal8g1443 8 18622805 18629036 ECH