Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1432 ATGACAACTTTGGTCTTATTCCTTTGGCTATTTGTCCCTACATTTGGCCAAGACCTTCTAAGTTGTGAGACAACATCACCAGAAGCCTTTAGCTACCATTGCAACAATGGAAATAGCTCACAAAACCAATGTGAAACATTTGCACTAATTTTCACTAATTCATACTACTCATCATTGTCTAATTTAACCACACACTTAGGACTTAACAAGTTTGTAATAGCAGAAGCAAATGGTTTCTCTGCTGAAACTGAGTTTCTTTCTCAGGGTCAGCCTCTTCTGATACCAATTCATTGCAAGTGCAAAGGTGACATTTTTCGCGCCGAGTTATCGAAGATTAGCATCAAAGGGGAGAGCTTTTATGGTATTACAAATTCACTTGAGGGCTTGACAACATGCAAGGCTATAAGGGAAAACAACCCTACTGTTTCACCTTGGAATCTTGATGATAAAGTCAAATTGGTTATTCCATTGAGATGTGCATGCCCATTTTCATCTCAACTTATTCAAGAACCAAGATTTCTACTTTCTTATCCAGTGAGTGAAGGTGATACAATTTCAAATTTGGCTTCGAAGTTCAATATTACTAAAGAAGCTATTATTTCTGCTAATAAAGTATCATCATCTGAAGAGTTTAGACCTGAAAACCTTACACCCTTTACATCAATTCTGATTCCACTAAATGGTAAACCTTTTCTTGGTCCTTTGGTTAAACCAATGGAACCAAATTCTGGTTCTAGTGCAACCAGAATCCCAGTAATTAGTCCACACAAGAAGTCGAAAATGTGGAAAAATGATTTGTATATTGGGCTAGGTGGTGTTGCAGTTGGTGTTTTCATTGCTTCTGTAGTAGCTTTCTTTTTTATGAGGTTAAAGAAGCACAAGAAGTTAGAAGAGAATTCAATCAAAGAAGCAGATTTGGAGCTGGAACATCTGAATCTTAGTGTAAGAACCACCACTACAAATGATAAGAAAGTTTCATTTGAAGGGTCTCAGGATACTCTTGATGGGAAAATTGTTGATTTGAACACGCCGCGTAAAATGTTGTTGGAGATATACACAAATGAAGATATGAGAAAAGCAACGGAGGATTTCAATTCAAGTAATCTAATTGAGGGATCGGTATTTCGCGGTCGGCTGATAGGAAAGGACATGGCAATTAAAAGAACAAAGACAGATATTGCTTCAAAGATAGATCTTGCCCTTTTCCATGATGCAATTCATCACCATCCAAACATACTAAGGCTTCTTGGAACAAGCTTATTCGATGGGCCGGAGTCATTTATCGTGTTCGAGTTTGCGAAAAATGGTTCGCTAAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAGTTCATTTCCTCCTGCTATTGCTTCTTGACTTGGAGCCAAAGGCTTAAGATATGTCTCGATGTGGCCGCGGCATTGCAATATATGCACGAGGTTATGAATCCGAGCTATTTGCATAGGAATGTAAAGAGCAGGAACATCTTTTTAGATGAAGAATTTGGAGCAAAGTTAGGCAATTTTGGAATGGCAGGGTGTGTTGAGAATGAAACTGAGGACCCGAATTTCTATTCTACTAACCCTGCATCATGGAGTATTGGTTATTTAGCACCTGAATATGTTCACCAAGGTATAATTTCTCCAAGCATTGATATATTTGCTTATGGTGTTGTTTTGTTGGAAGTTTTATCAGCTCAAACACCTATAAGCAGGCCTAATGACAAGGCGGACGGAAGCGTTTGGCTTACCGATAAAATCAAGTCGATTTCGATGTCAAAAAATGTTAATGAGCTAAGGGAGTGGATAGACAATGCATTAGGGGAGAATTATTCACTTGATGCAGTTGTTTCAGTGGCTAATATTGCAAGAGCTTGTGTGGAGGAAGATGCTTCTTTGAGACCAAGTGCAAGGGAAATAGTTGAGAAGCTATCAAGGTTGGTGGAGGAATTACCAGAAGGGGAACATAACATGTTAATGAGTGAAAGCTCTAGTAGTCCTTTGGTGAATGAAGTTGGAAAAATTCTGTGA 2034 0.3864 MTTLVLFLWLFVPTFGQDLLSCETTSPEAFSYHCNNGNSSQNQCETFALIFTNSYYSSLSNLTTHLGLNKFVIAEANGFSAETEFLSQGQPLLIPIHCKCKGDIFRAELSKISIKGESFYGITNSLEGLTTCKAIRENNPTVSPWNLDDKVKLVIPLRCACPFSSQLIQEPRFLLSYPVSEGDTISNLASKFNITKEAIISANKVSSSEEFRPENLTPFTSILIPLNGKPFLGPLVKPMEPNSGSSATRIPVISPHKKSKMWKNDLYIGLGGVAVGVFIASVVAFFFMRLKKHKKLEENSIKEADLELEHLNLSVRTTTTNDKKVSFEGSQDTLDGKIVDLNTPRKMLLEIYTNEDMRKATEDFNSSNLIEGSVFRGRLIGKDMAIKRTKTDIASKIDLALFHDAIHHHPNILRLLGTSLFDGPESFIVFEFAKNGSLKDWLHGGLAIKNQFISSCYCFLTWSQRLKICLDVAAALQYMHEVMNPSYLHRNVKSRNIFLDEEFGAKLGNFGMAGCVENETEDPNFYSTNPASWSIGYLAPEYVHQGIISPSIDIFAYGVVLLEVLSAQTPISRPNDKADGSVWLTDKIKSISMSKNVNELREWIDNALGENYSLDAVVSVANIARACVEEDASLRPSAREIVEKLSRLVEELPEGEHNMLMSESSSSPLVNEVGKIL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1432 677 PANTHER PROTEIN LYK2 2 673 - -
Lal8g1432 677 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 673 - -
Lal8g1432 677 SMART LysM_2 176 225 IPR018392 -
Lal8g1432 677 Pfam Protein tyrosine and serine/threonine kinase 383 645 IPR001245 GO:0004672|GO:0006468
Lal8g1432 677 Gene3D Phosphorylase Kinase; domain 1 339 432 - -
Lal8g1432 677 Pfam LysM domain 177 225 IPR018392 -
Lal8g1432 677 CDD LysM 176 213 IPR018392 -
Lal8g1432 677 ProSiteProfiles Protein kinase domain profile. 360 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1432 677 Gene3D LysM domain 175 225 IPR036779 -
Lal8g1432 677 SUPERFAMILY Protein kinase-like (PK-like) 346 651 IPR011009 -
Lal8g1432 677 ProSiteProfiles LysM domain profile. 175 224 IPR018392 -
Lal8g1432 677 Gene3D Transferase(Phosphotransferase) domain 1 433 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1432 Lal-Chr8 18510601 18512634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1432 23 672 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.089 4.12e-152 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal8g1432 PK_Tyr_Ser-Thr 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1432 - - gmx:100816082 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1432 8 18510601 18512634 Lal8g1432 8 18510601 18512634 ECH