Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1372 ATGGGTCGTTGCCCTTGTTTTGGATCGAGGAGGAAGAACAAAGGGGTGAAACTAAAGGCTCAGGATGAGGAAAACAAGTATGAAATGAACCATTTATCTATAGATGGTGCCTCTCAAAGATCTTCAGGACATATATCAGAATCAACTCCAACAAAGGAGACCGAAAATTATAACAACGAGGCTCGGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAGAATTTTAGAGATGAAACCTTTATTGGGCAAGGTGGATTTGGAACTGTGTATAAAGGAAAACTGGGCAATATGAGTCAGGTTGTAGCAGTTAAAAGACTTGATACTACAGGTGCCCAGGGAGAGAAAGAGTTTCTTGTGGAGGTTCTCATGCTCTCTCTTCTACGCCATCCGAACCTTGTTAGTTTATTCGGGTATTGTGCTGAAGGCGATCAACGTCTTCTTGTTTACGAGTACATGCCTCTTGGATCCTTAGAATATCATCTCCATGATCTTTCGCCAGACCAAGAAGCCCTTGATTGGGGCAAAAGAATGATGATAGCTGCAGGGGCAGCAAGGGGATTAAATTATCTACACAATGAAGCAAAACCTTCAGTTATATATAGGGATCTCAAATCATCAAACATATTATTAGATGAAGGGTTTCATCCAAAACTTTCTGATTTTGGGCTTGCAAAGTTTGGTCCAACGGGAGATCAGTCATTTGTGAACACTAGGGTCATGGGAACACATGGTTACTGTGCCCCCGAGTATGCTACAAGTGGAAAATTAACTATGAGATCTGATGTGTATAGTTTTGGGGTTGTGTTATTGGAGTTAATTACTGGACGCAGAGCATATGATGATACTGGTGGCCCTGAAAAGCATCTTGTTGACTGGGCACGCCCATTGTTTAGAGACAGAAAGAGTTTTCCAAGATTGGCAGATCCACGGTTGCAAGGTTGCTACCCGGGATCTAGTCTAAAGATGGCGATTGAATTGGCATCCATGTGTCTTAGAGAAGAGCCTCGACACCGGCCTGAAGCAGGCGATATAGTGCTTGCTCTAGATTACTTGTCATCCAAGCAATATACCCCAAAAGTATCCAACACAATGAACACTGAGGGTATGGAGAGTGGTGACTCTCCAAAAGAAACATCTACAATATTGGTCAAAGATTCACAAAGAGAGCAAGCTGTTGCAGAGGCCAAGTTGTGGGGTGAGACATGGAGAGATAAAAAGAGACAAAGTGGCCAAAGTAGTCCTGGTGAATTAGGAGATAGGTTTTGA 1269 0.4279 MGRCPCFGSRRKNKGVKLKAQDEENKYEMNHLSIDGASQRSSGHISESTPTKETENYNNEARIFTFRELATATKNFRDETFIGQGGFGTVYKGKLGNMSQVVAVKRLDTTGAQGEKEFLVEVLMLSLLRHPNLVSLFGYCAEGDQRLLVYEYMPLGSLEYHLHDLSPDQEALDWGKRMMIAAGAARGLNYLHNEAKPSVIYRDLKSSNILLDEGFHPKLSDFGLAKFGPTGDQSFVNTRVMGTHGYCAPEYATSGKLTMRSDVYSFGVVLLELITGRRAYDDTGGPEKHLVDWARPLFRDRKSFPRLADPRLQGCYPGSSLKMAIELASMCLREEPRHRPEAGDIVLALDYLSSKQYTPKVSNTMNTEGMESGDSPKETSTILVKDSQREQAVAEAKLWGETWRDKKRQSGQSSPGELGDRF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1372 422 MobiDBLite consensus disorder prediction 32 54 - -
Lal8g1372 422 Pfam Protein kinase domain 77 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1372 422 PANTHER OS07G0668900 PROTEIN 5 368 - -
Lal8g1372 422 Gene3D Phosphorylase Kinase; domain 1 37 152 - -
Lal8g1372 422 SMART serkin_6 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1372 422 MobiDBLite consensus disorder prediction 360 422 - -
Lal8g1372 422 MobiDBLite consensus disorder prediction 360 387 - -
Lal8g1372 422 PANTHER OS07G0668900 PROTEIN 5 368 - -
Lal8g1372 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lal8g1372 422 Gene3D Transferase(Phosphotransferase) domain 1 153 374 - -
Lal8g1372 422 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Lal8g1372 422 SUPERFAMILY Protein kinase-like (PK-like) 53 349 IPR011009 -
Lal8g1372 422 ProSiteProfiles Protein kinase domain profile. 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1372 422 CDD STKc_IRAK 82 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1372 Lal-Chr8 17326993 17333817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1372 52 413 Glycoside Hydrolase AT3G07070 57.221 5.68e-138 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal8g1372 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1372 K13430 - gmx:100809298 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1372 8 17326993 17333817 Lal8g1372 8 17326993 17333817 ECH