Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1313 ATGGATCCCAATGGTTCAAAGCAGCCACAACAACAAGGTAACAACAACAACAACATGGGAGAGAATAAAGCATCAGAAGTGAAGGATTTTCAGATTGTGATTGGTGAAAAAGATGATAACAGTAAGAAGCAATTAGCACCAAAGAGAGCTTCAAACAAAGACAGACACACAAAAGTTGAAGGGAGAGGAAGAAGAATAAGGATGCCAGCTTTATGTGCAGCTAGGATCTTTCAATTGACAAGAGAATTGGGTCATAAATCTGATGGTGAAACAATTCAATGGCTTCTTCAACAAGCTGAACCATCTATTATAGCAGCTACTGGAACTGGAACAATACCAGCATCTGCTATAGCTGCTGCTAGTAACTCAGTTTCACAACAAGGAACTTCTCTATCTTCTGGGTTGCACCAAAAACTTGATGAGTTAGGGTCAGGAAGTAGGTCAAGTTGGGCTATGGTTGGAGCAAATTTAGGAAGATCTCATGTGGCTGCAACAGGTTTATGGCCACCTCATGTTACTGGATTTGGATTCCAATCATCTTCTGGTCCATCTACACCTACTTTAGGTACTGAAAGTTCAAATTATCTTCAAAAAATTGGGTTCCCTGGGTTTGACTTACCTGCTCCAAACATGGGTCCTATGAGTTTCACTTCAATTTTGGGTGGTGGGTCTAACCAGAACATGCCTGGTTTGGAGCTTGGGTTATCACAAGATGGTTCTATAGGGGTCTTGAGTCCACAGACTTTGAGTCAGATTTATCAGCAGATGGGTCAACAAGGTAGAGTTCATCATCATAATCAGCATCAGCAGCAGCAGAATCAGCATCAGCAGCAGCAGAATCTGCATCAGCATCAGCAGCAACAGCAACAGCCTCCTACTAAGGATGATTCTCAAGGTTCAGAACAGTAG 909 0.4224 MDPNGSKQPQQQGNNNNNMGENKASEVKDFQIVIGEKDDNSKKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASAIAAASNSVSQQGTSLSSGLHQKLDELGSGSRSSWAMVGANLGRSHVAATGLWPPHVTGFGFQSSSGPSTPTLGTESSNYLQKIGFPGFDLPAPNMGPMSFTSILGGGSNQNMPGLELGLSQDGSIGVLSPQTLSQIYQQMGQQGRVHHHNQHQQQQNQHQQQQNLHQHQQQQQQPPTKDDSQGSEQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1313 302 MobiDBLite consensus disorder prediction 1 24 - -
Lal8g1313 302 Coils Coil 268 288 - -
Lal8g1313 302 MobiDBLite consensus disorder prediction 255 302 - -
Lal8g1313 302 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 301 IPR005333 GO:0003700
Lal8g1313 302 Pfam TCP family transcription factor 51 138 IPR017887 -
Lal8g1313 302 ProSiteProfiles TCP domain profile. 52 106 IPR017887 -
Lal8g1313 302 MobiDBLite consensus disorder prediction 1 65 - -
Lal8g1313 302 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 21 301 - -
Lal8g1313 302 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1313 Lal-Chr8 16190939 16191847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1313 21 253 TCP Transcription Factor Family AT3G27010 60.324 3.05e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal8g1313 TCP 5.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1313 - - pvy:116145554 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1313 8 16190939 16191847 Lal8g1313 8 16190939 16191847 ECH