Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1288 ATGGAGAATTATCCCATATTGTTCCCTTGTCCTTCTTCTTCTTCTAGCTATCAAATTTCAACTAGTAGAATGAATAGTGGTGAGAGTTCAAATGCAATCATGGGTTTAAGGCCTAGTCATGATAAGAGTATTGATCATGATCAACAACAATTGCATATAAGAGAACAAGTTCATAGAGATGAAATAATGCTTCATCAAAATAGTGGAAGAAGTATTAATGTGAAGGATTGTGTTGGTGAATCTAGAAATGATAATAAAAAGAAAAATATGCTTTTCAAACAAGGAGTGAGGAAATATGGCCAAAAAGCTGTTAAGAACAACAAATTTCAAAGGAGTTACTACCGATGCACGCATCAAGAATGCAATATGAAGAAACAAGTTCAACGCCTAACCAAAGACGAGGGTGTAGTTGTTACCACTTATGAGGGAGTACACATTCACCCAATTGAGAAGAAAACAGACAACTTTGAGCATATTTTGAGTCAAATGCAAATATACGTTCCATTTTGA 510 0.3451 MENYPILFPCPSSSSSYQISTSRMNSGESSNAIMGLRPSHDKSIDHDQQQLHIREQVHRDEIMLHQNSGRSINVKDCVGESRNDNKKKNMLFKQGVRKYGQKAVKNNKFQRSYYRCTHQECNMKKQVQRLTKDEGVVVTTYEGVHIHPIEKKTDNFEHILSQMQIYVPF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1288 169 SMART WRKY_cls 97 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g1288 169 Pfam WRKY DNA -binding domain 97 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g1288 169 ProSiteProfiles WRKY domain profile. 97 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g1288 169 SUPERFAMILY WRKY DNA-binding domain 97 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g1288 169 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 97 165 - -
Lal8g1288 169 Gene3D WRKY domain 74 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g1288 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 165 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1288 Lal-Chr8 15941488 15946628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1288 97 169 WRKY Transcription Factor Family AT5G13080 80.822 6.97e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal8g1288 WRKY 8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1288 - - gmx:732586 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1288 8 15941488 15946628 Lal8g1288 8 15941488 15946628 ECH