Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1282 ATGGATTGGGATTGGAAAGAGTTTACTTGTTATCCATCTGGGTTAGAAGTTGATAACAGTGGCTTTGAATTAGGAGGGATTAAGAAGATAAAGAAGAATGAAGTTGCTTCAGTGGGTTTGAGGCTTGGTGAGGCTTCTGATTTGATGGAAAACCCTGAATTAGGTATACCTAAGGAGTTGAAAGATTTTAAGACTGTGTTATCAACTCCAGGGTCGTCGAAGAGATCGCGTTCGAGTAATGGATTGCAGAATTTGTGTTGCTTGGTTGATGGATGCAACTCTGACCTCAGTGATTGCAGGGAGTATCATAAGCGTCATCGGGTCTGCGAAAAGCACTCGAAAACACCGGTTGTGTTGGTAGGCGGTAAACAGCAGAGGTTCTGCCAGCAATGCAGCAGGTTTCATTCACTTGGGGAGTTTGATGATGTCAAGAGGAGTTGCCGGAAACGTCTTGATGGTCATAATAGGCGCAGGAGGAAACCTCAGCCGCCATCTCTTTTCATGGCTGCTGAGGAATTTCTGTACAATTACAAGGGACCAAGGATCCTGCAATTTGGTAGTCCTCAGACATATGCAAACCCTATTATGAGAAATGTGTGGCCTGCCACTGCCAAAACTGGAGCTGAATCTGGTTATGATCATCGCCGACTTTTATATAGAATCGACAAGCATAATCAGGAGAAGGAAGTTCTTCTCTGGCAAGAAAATGACCCAAAAGCATGCAATGGTAATGAAGCAATGCTTGGAACTCCAATCTGCCAACCGACTTCTGGTGCCATTGCGGCAACAGCAAGTGGAAAGGGCAGTCGGAAACTGTCTTCTGATAGCAAACTTGGATCTTTTGACTCAAGTTGTGCTCTCTATCTTCTGTCAACACTTCAAACACAAAGCTCCAAGTTGAGTTTGGTGCAGTCTGGCACCACCTGCCCAATTCAATCTCCGTTCGGATCTACGAATTTGGATGCTGTGGATGAGTACTCACGCTCGGGAAGAGAAATAGATAAGCCTAATAGTGCGGTATTTGTTCTTGACTCAAATTCGACCAATCTTCATTGCAATGGGATGCTACAAATGGGACCTGATGGATTGGTGAAAAGTGGAGACTCACTGACCCTTCCCTCTTTCTGGGAGTAA 1134 0.4489 MDWDWKEFTCYPSGLEVDNSGFELGGIKKIKKNEVASVGLRLGEASDLMENPELGIPKELKDFKTVLSTPGSSKRSRSSNGLQNLCCLVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDDVKRSCRKRLDGHNRRRRKPQPPSLFMAAEEFLYNYKGPRILQFGSPQTYANPIMRNVWPATAKTGAESGYDHRRLLYRIDKHNQEKEVLLWQENDPKACNGNEAMLGTPICQPTSGAIAATASGKGSRKLSSDSKLGSFDSSCALYLLSTLQTQSSKLSLVQSGTTCPIQSPFGSTNLDAVDEYSRSGREIDKPNSAVFVLDSNSTNLHCNGMLQMGPDGLVKSGDSLTLPSFWE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1282 377 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 22 377 IPR044817 GO:0003677
Lal8g1282 377 Pfam SBP domain 87 160 IPR004333 GO:0003677
Lal8g1282 377 Gene3D - 77 148 IPR036893 GO:0003677|GO:0005634
Lal8g1282 377 ProSiteProfiles Zinc finger SBP-type profile. 84 161 IPR004333 GO:0003677
Lal8g1282 377 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 22 377 - -
Lal8g1282 377 SUPERFAMILY SBT domain 85 166 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1282 Lal-Chr8 15829542 15832374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1282 1 185 SBP-box Gene Family AT5G50670 45.274 3.49e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal8g1282 SBP 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1282 - - lja:Lj1g3v3847150.1 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1282 8 15829542 15832374 Lal8g1282 8 15829542 15832374 ECH