Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1131 ATGATGATGAATCAGCAACAGGGAGAGAAGAAGCAGCTTCAGAAAACCGAGGCCTATGGTTTAAGGGCAAGTGTTGGGGCTAAGCTTGGCCTTGTTAATGTTTCAGGAGACATCAAAATAACTACAACTACTCATGGGTCGGGTCAGATCCATAATGATCATAACCATAATCTTGGTCTTGTTCACTTTGGGAATGTGAATAGGAAGAAAAGAATGGCTAGGCAGAGAAGATCTTCTACTAACACCACCACATTGATGCGGATAGAGATGGATCAACTTAACCCTTTCTCTTCCAAACACACACCACTGACTCAACCACCACCACCACCGCCACCACCACTGTCTCTTTCTGCTGCTCCTCCCTCACACGTGCCAATGCCTCCATTTCCAACTAATATAGTTTCCACTACTCTCCCTCCAGCTCCTGAAACCGATCATGGAAGGTTGAGATTCCTTTTCCAAAAGGAGCTAAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGGTATTGCCAAAGAAAGCCGCAGAGACTTTCCTCCCTTCCCTTGAATCAAAGGAAGGAATTCTTATCAGCATGGACGATCTAGACGGTATTCATGTATGGAGTTTCAAGTACAGGTACTGGCCTAATAACAATAGTCGGATGTATGTACTTGAAAACACTGGGGACTTCGTTAACACACACGGCCTGCGCCTTGGTGATTCCATTATGGTTTACCAAGATAATCAAAACAATAACTATGTTATTCAAGCCAAAAAAGCTTCTGATAATGATGAATTTATGGAAGAAATAAGTGATACTACAAATGATATCTTCCTTAATGATTATGAGGTTAACAAACCTGGTTGCTTCAACATAACCTATCCTGCGGTGAACGATATGACGGACATGTCATTCATATATGACACGACCTTCTCAAATGACTCACCACTTGATTTTTTGGGTGGATCAATGACCAATTTTTCAAGAATTGGTCCAGTTGAAACCTTTGGCTCTGTTGAGAATTTCTCACTTGATGACTTCTATTAA 1029 0.4169 MMMNQQQGEKKQLQKTEAYGLRASVGAKLGLVNVSGDIKITTTTHGSGQIHNDHNHNLGLVHFGNVNRKKRMARQRRSSTNTTTLMRIEMDQLNPFSSKHTPLTQPPPPPPPPLSLSAAPPSHVPMPPFPTNIVSTTLPPAPETDHGRLRFLFQKELKNSDVSSLRRMVLPKKAAETFLPSLESKEGILISMDDLDGIHVWSFKYRYWPNNNSRMYVLENTGDFVNTHGLRLGDSIMVYQDNQNNNYVIQAKKASDNDEFMEEISDTTNDIFLNDYEVNKPGCFNITYPAVNDMTDMSFIYDTTFSNDSPLDFLGGSMTNFSRIGPVETFGSVENFSLDDFY 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1131 342 MobiDBLite consensus disorder prediction 96 123 - -
Lal8g1131 342 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 64 342 - -
Lal8g1131 342 SMART B3_2 153 255 IPR003340 GO:0003677
Lal8g1131 342 CDD B3_DNA 151 253 IPR003340 GO:0003677
Lal8g1131 342 Gene3D - 149 267 IPR015300 -
Lal8g1131 342 Pfam B3 DNA binding domain 153 251 IPR003340 GO:0003677
Lal8g1131 342 MobiDBLite consensus disorder prediction 101 123 - -
Lal8g1131 342 SUPERFAMILY DNA-binding pseudobarrel domain 151 249 IPR015300 -
Lal8g1131 342 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Lal8g1131 342 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 64 342 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1131 Lal-Chr8 9673894 9677188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1131 46 342 B3 DNA Binding Superfamily AT3G26790 49.697 7.21e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal8g1131 B3 3.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1131 - - gmx:100783961 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1131 8 9673894 9677188 Lal8g1131 8 9673894 9677188 ECH