Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1126 GAGACAGGTAGAGAAAAGAGAGGTTCAATGGCGAGCAGGTACTGGGTAGTTTCTCTTCCCGTCCAAAATTCTCCATCCACTCTTTGGACCAAACTGCAGGATCAAATCTCTAAGCACTCCTTCGATACTCCTCTTCATAGATTCAATATCCCTAACCTCCGCGTCGGAACCCTAGATTCTCTCCTCTCCCTCAGCGATGATCTCGCCAAGTCGAATAATTTCATGGAAGGAGTGTCGCACAAGATCAGGCGCCAGATTGAGGAGCTGGAGAGGATTTCCGGCGTGGACAGCGGCGGCCTCACCGTCGATGGAGTTCCTGTTGATTCCTACTTGACAAGGTTTGTTTGGGATGAAGCTAAGTACCCGACTGTGTCACCGTTGAAGGAGATCGTGGATGGGATTCATGGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGCGTTTCTGAATATAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCTGTCCGAGATCTTTCCAACTTGGTAAAACCTGAGGACATTGTTACTTCAGAGCATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTGTCAAGCTATGAAACTTTGACAAGCTATGTGGTCCCCAGGTCTTCTAAGAAGCTGTATGAAGATAATGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTTGCGGACAATTTTAGAACTAGTGCACGGGAAAAGGGGTTCCAAATTCGTGATTTCGAATACAGTCCAGAAACACATGAGAGTCGAAAACAGGAGTTAGACAAATTGGTTCAAGATCAGGAAAGTTTGAGAGGTTCTTTGTTGCAATGGTGCTATACCAGCTATGGAGAGGTTTTCAGCTCCTGGATGCACTTCTGTGCTGTACGTTTATTTACTGAGAGCATTCTGAGATATGGTCTGCCACCTTCTTTCTTGGCAAGTGTTTTGGCTCCATCAGTAAAGGCTGAAAAGAAAGTACGTTCTATCCTTGAAGGGCTGAGTGATAGCACAAACAGGCAAGGGATCATGGGGGGAGGAGACGAGGAGGCGAACAATGTGTTTGGCTGGAGTGCATACTGGAAGACTGAGGATGAAGGAGGTGCCGGGATGGCTGGCTTAGCTGGTGATGCAGATGCCCATCCATATGTCTCTTTTACTATCAATCTTATTTGA 1212 0.4579 ETGREKRGSMASRYWVVSLPVQNSPSTLWTKLQDQISKHSFDTPLHRFNIPNLRVGTLDSLLSLSDDLAKSNNFMEGVSHKIRRQIEELERISGVDSGGLTVDGVPVDSYLTRFVWDEAKYPTVSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIVTSEHLTTLLAIVSKYSQKDWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHESRKQELDKLVQDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFTESILRYGLPPSFLASVLAPSVKAEKKVRSILEGLSDSTNRQGIMGGGDEEANNVFGWSAYWKTEDEGGAGMAGLAGDADAHPYVSFTINLI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1126 403 Gene3D Vacuolar atp synthase subunit c; domain 1 14 343 - -
Lal8g1126 403 CDD V-ATPase_C 14 400 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal8g1126 403 Gene3D - 172 260 - -
Lal8g1126 403 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 10 402 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal8g1126 403 SUPERFAMILY Vacuolar ATP synthase subunit C 9 402 IPR036132 GO:0015078|GO:0033180|GO:1902600
Lal8g1126 403 Pfam V-ATPase subunit C 14 358 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal8g1126 403 Gene3D - 50 321 - -
Lal8g1126 403 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 10 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1126 Lal-Chr8 9499121 9505514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1126 10 402 Primary Pumps ATPases(2) AT1G12840 78.880 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1126 K02148 - gmx:100780187 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1126 8 9499121 9505514 Lal8g1126 8 9499121 9505514 ECH