Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1033 ATGACGAGGTTGTTTGCTGTTTCTAGGGTGATTAAAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGGTCCACTACCTATTGATCAAGGAGAGAATAGGGTGCAACCTCCTGCCCAGAACAGAACTAGGAGGCGAGTTGGAAGTGGAAGAGGAAGAGGAAGAGGTGGTAATGCCACAACTGTAGGCAAAGGGCCTTCACCAGTTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGTGGAGCAAGGGTAGTTGATCTCGATCCTGAACCTTGTGACGTCCTTCCGGAACCTGTTGCTTTAGGGGCTCCGATACCCGTTAACAATAACGTAGAGGTAGTGGCCAATAATAATATCATGATGGAGGGTGGAAGTGGAGACAAGGCGGTGGCAGCTGAAGAGGAAGCAAACACAACACCTGTCCCTGAAAGGGTGCAAGTTGGTGGCTCACCTGTATATAAGATTGAAAGGAAATTGGGAAAGGGTGGCTTCGGCCAAGTTTATGTTGGCAGAAGGATTAGTGGGGGCTCTGATCGAACAGGCCCTGATGCAATCGAGGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGATGCAATTATGGCCCTCCTTATGAGTGGCAAGTGTACAATACTCTGAATGGTTGCTATGGAATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTAGTCATGGACATCCTTGGGCCCAGTCTCTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCTCCAAATATGGTTGCTTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTCAAACCAGAAAACTTTTTGCTTGGTCAACCGGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCTTCTAGGTGGAAGGATGCATCATCTGGCCAACATGTGGAATATGATCAGAGACCTGATATATTCAGAGGAACAATAAGGTATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATATACTTTAATATTTCTAATAAAAGGGAGATTACCCTGGCAGGGTTACCAGGGTGACAATAAAAGTTTTCTCGTTTGTAAGAAAAAGATGGGCACTTCATCAGAGTTGATGTGCTGCTTTTGTCCCGCTCCATTTAAGCACTTCCTTGAAGCTGTTACCAACATGAGATTTGATGAAGAGCCAAATTATTCGAAGCTAATTTCACTTTTTGATAGCTTGATTGAACCATGCACTCCGTTGAGACCTATCAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATTAACCTGGAAGAAGATGAACAGCCTAAGAAGAAAGTCCGATTAGGGAGTCCTGCTATGCAGTGGATATCAGTGTATAATGCACGTCGTCCCATGAAGCAGAGATATCACTATAATGTAGCAGACACTAGGTTGCGACAGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCGCTTCAGGAAATCTCTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTATGAGTTGTCAGCAGCCTTCCTGCATAAGGATTGGATTATGGAGCAATGGGAGAAAAACTACTATATTAGTTCAATAGCTGGTGCAGTTAATGGCAGTTCCCTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAATCGTATAAAGTCAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAATCGATGGGGCGTTGTTATGTCCAGGAATGCCGGGTATTCTGATCAGGTTGTGGAGCTAGACTTTTTGTATCCAAGTGAAGGAATCCATCGACGGTGGGAGAGTGGTTACCGGATTACATCTATGGCTGCCACTAGTGATCAGGCAGCCTTCATTCTAAGCATCCCAAAACGTAAATTACTTGATGAAACTCAAGAGACTTTGCGCACATCTGCCTTCCCTAGCACTCATGTAAAGGAAAAATGGTCTAAGAATCTATATATTGCCTCAATATGTTATGGTCGAACCGTTTGCTAG 2199 0.4484 MTRLFAVSRVIKVGYDLNGERMPELRSGARRSKRLGDLQPGPLPIDQGENRVQPPAQNRTRRRVGSGRGRGRGGNATTVGKGPSPVVPTRRTAAGRGRGARVVDLDPEPCDVLPEPVALGAPIPVNNNVEVVANNNIMMEGGSGDKAVAAEEEANTTPVPERVQVGGSPVYKIERKLGKGGFGQVYVGRRISGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSSELMCCFCPAPFKHFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPAMQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVAASGNLWALIMDAGTGFSSQVYELSAAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1033 732 PANTHER CASEIN KINASE-RELATED 125 706 - -
Lal8g1033 732 SUPERFAMILY Protein kinase-like (PK-like) 171 458 IPR011009 -
Lal8g1033 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Lal8g1033 732 ProSitePatterns Protein kinases ATP-binding region signature. 177 208 IPR017441 GO:0005524
Lal8g1033 732 MobiDBLite consensus disorder prediction 24 102 - -
Lal8g1033 732 Gene3D Transferase(Phosphotransferase) domain 1 135 487 - -
Lal8g1033 732 Pfam Protein kinase domain 171 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1033 732 SMART serkin_6 171 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1033 732 PANTHER OS01G0772600 PROTEIN 125 706 - -
Lal8g1033 732 CDD STKc_CK1 171 445 - -
Lal8g1033 732 ProSiteProfiles Protein kinase domain profile. 171 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1033 Lal-Chr8 8169654 8176484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1033 288 445 MAP Kinase Kinase Kinase AT5G50180 24.375 2.14e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lal8g1033 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1033 - - gmx:100801967 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1033 8 8169654 8176484 Lal10g0425 10 10350965 10358146 LSH