Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1000 ATGTATAGTTGGAATAAAAATTGGATTTTTGTTCAACTTGAGTGGCTTGAGCAATTTCTGAAGCTTCTGGTTCTAAATACCTTGACAATGTTAAATAGAAGCCATTCTTCATTGCTTCTATTGTTGGTTACTATTTTAGTATATGTTCATCATTCAGAGGAACTTCAATCTTTTCAATCTCAGAACCTTCTAAGAATTCAAAGGCTATTGAACTTTCCTTCTGCTTTAAGCAACTGGAATAAGAACACAGATTTTTGCAGCACAAATTCAAGCTCTTATCTCAATATAGTATGCTATGAAGGCAACATAACTCAACTGAACATAATAGGTGAAAGAAGAACTCCTCTTGAAAATTTCTCTATAAATTCCTTTGTCACAACAATGGTAAGGCTTCAAAGTTTGAAGGTACTTACACTTGTTTCTCTTGGAATATGGGGTCCATTGCCTGCTGAGATTGCTAATCTGTCATCACTGGAAATTGTTAATGTGAGTTCGAATTTTATGCATGGTTCCATCCCTTACGAGATTTCGTCGCTTTCAAATCTCCAAACACTCATTCTTGATAACAACATGTTTTCCGGCCAGCTTCCTAATTGGTTTGATTTAATTCCGGCCTTAAATGTGTTAAGTTTTAAAAATAATTTGTTCAATGGATCTCTACCGAATTCGGTGGGTAGGTTGCTGAGTTTGCGAATTCTTTCACTTTCACATAATCACTTCAATGGGACAGTACCTGATTTGAGTAGTTTGAAAAATCTCCAAGTGCTGGAACTGGATGATAATGCTTTTGGACCTCAGTTTCCTAGGCTTGGTAACAAGTTGGTTGCTCTAGTGCTAAGAAACAATAGGTTCCGGTCTGGTATCCCTGCCGAAGCGAGCTCGTATGCTCTGCTTCAGAAATTCGATATCTCATCAAATACATTTGTGGGGCCATTCCCACCAGCATTGTTATCACTTCCTTCTATTACTTACCTGAACATTTCTGGGAACAAATTAACCGGGATGCTTTTTGAGAACCTATCTTGCAATTCCGAACTCGATGTGGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAGATGTTTAGTGTCAAACTCCAGTGATAATGATAGGACTGTTTTGTATGCGAGAAATTGTCTTGAGAAACCGAATCAAGATCAGCAGCCACAGACCTTTTGCCAGAGGGAAGCTGTAGCTGTGGGAATATTGCCTGACAGAAAGAATCATACGAAAGCATCGAATGTGTTTCTTTCAATAGGCGTCATAGGTGGGACTATTGGAGGTGTTGCACTTGTTTTGCTGATTTTCTTTGTTATTAGAAGAGGAAATGCCAAAAGCAAAATAAAGAACCCTGAAACAAGATTAATTTCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGGTACATATCTCAAACAAAGAAGTTCGGAGCCGTTGGGCTGCCAACGTATCGAAGTTTCTCATTGGAAGAGATTGACGCAGCTACAAACAACTTTGACAATGCTTCTTTCATGGGTGAAGATTCTTATGGCCAGATGTACAGAGGTCAGCTGAAGAATGGTTTGCTTGTAGCTATTAGATGTGTAGAAATGAAAAAGAGCTACAGCACTCAAAACTATATGCACCATATAGAGCTGATATCAAAACTTAGGCATCGTCATTTAGTCAGCGCTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAGAATATTTCTTGTCTTCGAATACTTACCAAATGGCACACTCAAGAGCTGGATCTCTGGAGGGCAAGCCAGAAAGCCGATGAGTTGGACCCAACGCATAGGAGCTGCAATTGGAGTAGCGAAGGGAATCCAATTTTTGCACACAGGGATTGTCCCTGGTGTATATTCCATTAATCTCAAGATAGAAGATGTGTTATTGGATCAGAATCTTGTTGCAAAAATCAGCAGCTATAACCTTCCTTTGTTATCTAACATGGGAAAGTTCCTATTGCTACACCTTACATTACCTTGCAGGTTCGGCATGGAAGCTCTTCCAGTAGATTCAAAAATTCTAGCATTAATAAAAGGTCTCGTGCATAAAATACTTCGGATACTTGTACACACACATAGGGAGCAACTTAGTGTGAAATATGAAGATAAGTCTGATATACATGACTTCGGAGTAATGCTTCAGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAAAGATGTTGACGCCTTTAAGGATCTGTTGCAAGCAAGCGTAGCGGCTGATGATGAAGCTCGGAGGAGCGTTGTTGATCAAGAAATCCGTAAGGCGTGTTTGGATCAATCATTGAAGACGATGATGGAGATTTGTGTGAGGTGCCTGGTTAAAGAGCCTGCAGATAGGCCTTCTATAGAAGATGTCTTGTGGAATTTGCTGTTTGCTGCTCAAGTACAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGATGGGTCACCTGGCTCACCTTTACAGCCTCCAACACTGACCTTTGATTAG 2526 0.3994 MYSWNKNWIFVQLEWLEQFLKLLVLNTLTMLNRSHSSLLLLLVTILVYVHHSEELQSFQSQNLLRIQRLLNFPSALSNWNKNTDFCSTNSSSYLNIVCYEGNITQLNIIGERRTPLENFSINSFVTTMVRLQSLKVLTLVSLGIWGPLPAEIANLSSLEIVNVSSNFMHGSIPYEISSLSNLQTLILDNNMFSGQLPNWFDLIPALNVLSFKNNLFNGSLPNSVGRLLSLRILSLSHNHFNGTVPDLSSLKNLQVLELDDNAFGPQFPRLGNKLVALVLRNNRFRSGIPAEASSYALLQKFDISSNTFVGPFPPALLSLPSITYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNSSDNDRTVLYARNCLEKPNQDQQPQTFCQREAVAVGILPDRKNHTKASNVFLSIGVIGGTIGGVALVLLIFFVIRRGNAKSKIKNPETRLISENAASGYTSKLLSDARYISQTKKFGAVGLPTYRSFSLEEIDAATNNFDNASFMGEDSYGQMYRGQLKNGLLVAIRCVEMKKSYSTQNYMHHIELISKLRHRHLVSALGHCFECSLDDSSVSRIFLVFEYLPNGTLKSWISGGQARKPMSWTQRIGAAIGVAKGIQFLHTGIVPGVYSINLKIEDVLLDQNLVAKISSYNLPLLSNMGKFLLLHLTLPCRFGMEALPVDSKILALIKGLVHKILRILVHTHREQLSVKYEDKSDIHDFGVMLQELILGRTIKSRKDVDAFKDLLQASVAADDEARRSVVDQEIRKACLDQSLKTMMEICVRCLVKEPADRPSIEDVLWNLLFAAQVQDAWRGDSQSSDGSPGSPLQPPTLTFD 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1000 841 Gene3D Transferase(Phosphotransferase) domain 1 589 823 - -
Lal8g1000 841 SUPERFAMILY L domain-like 68 367 - -
Lal8g1000 841 MobiDBLite consensus disorder prediction 820 841 - -
Lal8g1000 841 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 38 667 - -
Lal8g1000 841 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 718 829 - -
Lal8g1000 841 Pfam Protein tyrosine and serine/threonine kinase 512 659 IPR001245 GO:0004672|GO:0006468
Lal8g1000 841 ProSiteProfiles Protein kinase domain profile. 506 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g1000 841 SUPERFAMILY Protein kinase-like (PK-like) 488 810 IPR011009 -
Lal8g1000 841 Gene3D Ribonuclease Inhibitor 275 383 IPR032675 -
Lal8g1000 841 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 38 667 - -
Lal8g1000 841 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 718 829 - -
Lal8g1000 841 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Lal8g1000 841 ProSiteProfiles Leucine-rich repeat profile. 229 251 IPR001611 GO:0005515
Lal8g1000 841 Gene3D Ribonuclease Inhibitor 56 274 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1000 Lal-Chr8 7766691 7773650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1000 72 837 Miscellaneous Gene Families AT3G03770 58.968 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lal8g1000 PK_Tyr_Ser-Thr 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1000 - - lang:109358707 1346.26