Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0973 ATGGATTTCTTACACACTCCTGAAATTCAGATATTTGTTGGTGTTGCTGTGGCTGTTGTAGCTGTTGGTGTTGGTGCTTTCTACCTCTATTCATCTAAAAAGCCCAAAGCTTCCTTGGACACGGAGAATTTCAAGGGCTTTAAACTTGTCAAGCGTGATCAACTAAGCCATAATGTTGCGAAGTTCAAATTTGAACTCCCAACACCAACTTCTGTATTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGAAAGGATAGACAAGGTGAAGATGTTATCAAACCATATACCCCTACTACTTTGGATTCCGATGTTGGATATTTTGAACTAGTTATTAAGATGTACCCACAAGGAAGGATGTCACATCATTTCCGTGAGATGCGTGTTGGTGACTATCTTGCAGTTAGAGGACCCAAGTCACTTGTATACAGACTTTTCAAGGGACGTTTCAAGTACCAACCTGGCGAGGTTCGAGCATTTGGGATGCTTGCTGGAGGGTCTGGAATCACTCCAATGTTCCAAGTCGCTAGAGCTATATTAGAAAACCCAAATGACAAGACCAAAGTGCATCTTATATATGCCAATGTTACATATGAGGACATTCTTTTGAAGGAAGAACTCGATGGCCTTACTACTAACTATCCGGATCAGTTCAAAATATACTATGTCTTGAATCAGCCTCCTGAAGTTTGGGACGGCGGTGTTGGATTTGTATCGAAGGAGATGATCGAAACCCATTTCCCGGCTCCAGCACATGATGTCAAGATATTGAGATGTGGTCCGCCACCGATGAACAAGGCCATGGCTGCTCACCTCGATGCCATCGGATATGCTCCCGAGACGCAGTTTCAGTTCTGA 861 0.4367 MDFLHTPEIQIFVGVAVAVVAVGVGAFYLYSSKKPKASLDTENFKGFKLVKRDQLSHNVAKFKFELPTPTSVLGLPIGQHISCRGKDRQGEDVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDYLAVRGPKSLVYRLFKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPNDKTKVHLIYANVTYEDILLKEELDGLTTNYPDQFKIYYVLNQPPEVWDGGVGFVSKEMIETHFPAPAHDVKILRCGPPPMNKAMAAHLDAIGYAPETQFQF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0973 286 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 286 - -
Lal8g0973 286 Pfam Oxidoreductase FAD-binding domain 47 141 IPR008333 -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 73 84 - -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 95 102 - -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 131 145 - -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 162 181 - -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 200 211 - -
Lal8g0973 286 PRINTS Cytochrome B5 reductase signature 256 264 - -
Lal8g0973 286 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 286 IPR001834 GO:0016491
Lal8g0973 286 Gene3D - 142 286 IPR039261 -
Lal8g0973 286 CDD cyt_b5_reduct_like 47 286 - -
Lal8g0973 286 Pfam Oxidoreductase NAD-binding domain 163 269 IPR001433 GO:0016491
Lal8g0973 286 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Lal8g0973 286 SUPERFAMILY Riboflavin synthase domain-like 38 140 IPR017938 -
Lal8g0973 286 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 149 282 IPR039261 -
Lal8g0973 286 Gene3D Translation factors 34 139 - -
Lal8g0973 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 162 181 IPR001709 GO:0016491
Lal8g0973 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 200 211 IPR001709 GO:0016491
Lal8g0973 286 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 256 264 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0973 Lal-Chr8 7433990 7438760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0973 2 286 NADPH P450 reductases AT5G17770 81.818 3.01e-164 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0973 K00326 - gmx:100816447 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0973 8 7433990 7438760 Lal10g0526 10 12650228 12661923 LSH