Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0970 ATGGGAAGGCCTCCTTGCTGTGACATAGTTGGTATCAAGAAGGGTCCATGGACACCTGAAGAGGATATAATCCTTGTCTCTTACATCCAAGAACATGGTCCTGGAAATTGGAGATCAGTGCCTACTAATACTGGTAATTCAGCTACTTTTTTCTTATATTCTCTATGTCCTTTCTTGTTTTGTTATGGAATTAACCTCCCTCGGCATGTTTACGAGTTGGGTTTCGGAGAGGAAGGGTTATCAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACAAATTACCTTAGGCCAGGAATCAAAAGAGGGAATTTCACTCCTCATGAGGAAGGAATGATAATTCATTTGCAAGCTCTACTGGGTAACAAGTAA 369 0.4173 MGRPPCCDIVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGNSATFFLYSLCPFLFCYGINLPRHVYELGFGEEGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0970 122 SUPERFAMILY Homeodomain-like 11 43 IPR009057 -
Lal8g0970 122 SMART sant 13 97 IPR001005 -
Lal8g0970 122 Pfam Myb-like DNA-binding domain 17 109 - -
Lal8g0970 122 ProSiteProfiles Myb-like domain profile. 13 95 IPR001005 -
Lal8g0970 122 PANTHER TRANSCRIPTION FACTOR MYB60 78 122 - -
Lal8g0970 122 PANTHER TRANSCRIPTION FACTOR MYB60 1 45 - -
Lal8g0970 122 SUPERFAMILY Homeodomain-like 81 122 IPR009057 -
Lal8g0970 122 CDD SANT 16 95 IPR001005 -
Lal8g0970 122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 99 IPR017930 -
Lal8g0970 122 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 78 122 - -
Lal8g0970 122 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 45 - -
Lal8g0970 122 Gene3D - 13 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0970 Lal-Chr8 7393700 7395748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0970 1 122 MYB Transcription Factor Family AT5G62470 63.115 4.61e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal8g0970 Myb_DNA-bind_6 1.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0970 K09422 - gmx:100802204 176.022