Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0953 ATGTGGCCGCATCATTGTGATTCGGAGTCACACCGCAATTGCGGCGTGATGCGGTTGCGACAGTCACCGCAACCACAATATTGTGGCCGCATTAGCGGACGCTTAGTGGAAAATGTGTGGTTGTCCTTGTTTGGGGGTGCAGTACAAACCATGTATCATGAAAAGAAGTTTTCAGCATCAACCATGATGCCACATGAATCTCAATGTAGTTCTGAACAACTTGCAAATGTTGCGGTTTTGGGTGGATCTTCCATGAAAAATGCCACATCGGCTGGGGGAAGTGGGAAACAACGCTTACGATGGACATCCGATCTTCACGACCATTTTGTGGATGCCATTACACAGCTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTTTGAGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTCAAAAGCCATTTACAGAAGTATCGCCTTGCAAAGTACTTGCCTGAATCTTCAGCTGATGATAAAGATTCTAAAGATGAGAAAAGGAACTCTGGAGACAGCATTTCTGGCGCTCATTCTTCCCCGGGATTTCAAATCAATGACGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTTCAACAGCAGTTGCAATTGAGAATAGAAGCACAAGGTAAATACTTGCAGAAGATCATAGAAGAACAGCAGAAGTTAGGTAGTACCTTGACAGCCACGGAAACACCACCATTGTCCCACGATGCGCAAAATAATACTCAGTCAAATCCTTCTGGATATAGCGATGCCCCTGCAGGTACGTTATCTGCGCTGAAAAAACAGAAAACCGATGTTGGTCCAAAGGACGGCCTCACTGCTTCACGGGTGCCTACAAATAGTACAGAGAAGACTGATTGTAGTGCTGATAAGATGGATCCAAACTTGCATGAAGGTGATGCTGAGTTCGGATTTGATTTGGAGACAGAAAAGGATGAAGATAAGGAAAGTGAGCACTGA 990 0.4495 MWPHHCDSESHRNCGVMRLRQSPQPQYCGRISGRLVENVWLSLFGGAVQTMYHEKKFSASTMMPHESQCSSEQLANVAVLGGSSMKNATSAGGSGKQRLRWTSDLHDHFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADDKDSKDEKRNSGDSISGAHSSPGFQINDALRMQMEVQKRLHEQLEVQQQLQLRIEAQGKYLQKIIEEQQKLGSTLTATETPPLSHDAQNNTQSNPSGYSDAPAGTLSALKKQKTDVGPKDGLTASRVPTNSTEKTDCSADKMDPNLHEGDAEFGFDLETEKDEDKESEH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0953 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 53 323 IPR044848 GO:0003700
Lal8g0953 329 MobiDBLite consensus disorder prediction 237 329 - -
Lal8g0953 329 PANTHER OS05G0491500 PROTEIN 53 323 - -
Lal8g0953 329 MobiDBLite consensus disorder prediction 157 184 - -
Lal8g0953 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Lal8g0953 329 Coils Coil 187 207 - -
Lal8g0953 329 Pfam Myb-like DNA-binding domain 99 149 IPR001005 -
Lal8g0953 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 153 IPR017930 -
Lal8g0953 329 Pfam MYB-CC type transfactor, LHEQLE motif 185 230 IPR025756 -
Lal8g0953 329 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Lal8g0953 329 Gene3D - 95 154 - -
Lal8g0953 329 MobiDBLite consensus disorder prediction 237 261 - -
Lal8g0953 329 MobiDBLite consensus disorder prediction 296 329 - -
Lal8g0953 329 MobiDBLite consensus disorder prediction 157 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0953 Lal-Chr8 7239125 7242447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0953 86 231 G2-like Transcription Factor Family AT3G04450 52.740 7.12e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0953 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0953 - - gmx:100783132 388.652