Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0945 ATGCATAAGATGGGAAGAACAAGGTTACTTGTATCGGATTTTGTATTATCTTTCATGTGGGTATGGTCAAGTGTTATTGTTAGAATATTTGTCTTCAAATACTTGAGTTTGGGACATGACCACCTTGGTGAGATTGTTAAAGCTGCATTATCTGTCATTAACATGTTCCTGTTTGCTTTCCTTGTCAATTTTACACGTGGTGGGGCCTACAATCCTCTCACTGTTTTGTCTAGTGCTATGTCTGGGGATTTTGCTAACTTCATTTATTGTGTTGGTGCTAGAATTCCCACCCAGGTGCTTGGATCTATTGTTGGAGTTAAACTTATTATTGATACCATTCCCGAAGTAGGAAGGGGACCGCGTTTGAATATTGACATTCATCAGGGTGCATTGACAGAAGGATTACTAACATTTGCAATTGTGATCATTTCGCTTGGGCTTGCCACAAAAATTCGTGGAAGTTTCTTCATGAAGACTTGGATCTCTAGCCTCTCCAAGTTAACACTTCACATACTTGGCTCTGACCTGACTGGTGGTTGTATGAACCCCGCATCTGTAATGGGATGGGCTTATGCAAAGGGAGATCACATAACAAAGGAGCACATCCTTGTATACTGGCTTGCCCCTATAGAGGCAACCATATTGGCAGTGTGGATTTTCAAATGGTTAGTCAAGCCTGAAAAACAAGATAAAACAGACTCAAAAAGTAAATCGGATTGA 720 0.4056 MHKMGRTRLLVSDFVLSFMWVWSSVIVRIFVFKYLSLGHDHLGEIVKAALSVINMFLFAFLVNFTRGGAYNPLTVLSSAMSGDFANFIYCVGARIPTQVLGSIVGVKLIIDTIPEVGRGPRLNIDIHQGALTEGLLTFAIVIISLGLATKIRGSFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYAKGDHITKEHILVYWLAPIEATILAVWIFKWLVKPEKQDKTDSKSKSD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0945 239 PANTHER AQUAPORIN SIP2-1-RELATED 3 239 - -
Lal8g0945 239 PANTHER AQUAPORIN SIP2-1-RELATED 3 239 IPR044226 GO:0015267
Lal8g0945 239 SUPERFAMILY Aquaporin-like 4 230 IPR023271 -
Lal8g0945 239 PRINTS Major intrinsic protein family signature 8 27 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 PRINTS Major intrinsic protein family signature 132 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 Pfam Major intrinsic protein 6 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal8g0945 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0945 Lal-Chr8 7166887 7170371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0945 4 239 Major Intrinsic Protein MIP AT3G56950 60.759 9.74e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0945 K09875 - gmx:100786138 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0945 8 7166887 7170371 Lal10g0376 10 9406815 9411155 LSH